RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ATP5OP48047 213 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 ENTPD1P49961 510 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 THOP1P52888 689 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 TRIML2Q8N7C3 387 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 CMASQ8NFW8 434 aaPredicted RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 GSDMBQ8TAX9 411 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 ZNF518BQ9C0D4 1074 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 ELP3Q9H9T3 547 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 RRN3Q9NYV6 651 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 A0A0G2JLL6 359 aaPredicted RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 ITGBL1O95965 494 aaPredicted RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 KRT3P12035 628 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 IDO1P14902 403 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 PSMC3P17980 439 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 LIG4P49917 911 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 PGM5Q15124 567 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 PRRT2Q7Z6L0 340 aaPredicted RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 C10orf107Q8IVU9 208 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 CHERPQ8IWX8 916 aaKnown RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 DEPDC1BQ8WUY9 529 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 NLRP7Q8WX94 980 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 ZNF512Q96ME7 567 aaPredicted RBP18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 OSBPL6Q9BZF3 934 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 PFDN4Q9NQP4 134 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 RNF11Q9Y3C5 154 aa18.16■□□□□ 0.5
CDKN1B-201ENST00000228872 SRCAPQ6ZRS2 3230 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 CXCL11O14625 94 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 GLRA3O75311 464 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 PDGFRBP09619 1106 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 MYCLP12524 364 aaPredicted RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 NUDT2P50583 147 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 MMRN1Q13201 1228 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 TMEM132BQ14DG7 1078 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 ZNF394Q53GI3 561 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 OR5B17Q8NGF7 314 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 RNF146Q9NTX7 359 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 TJP2Q9UDY2 1190 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 PRSS51A0A1B0GVH4 220 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 AIM2O14862 343 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 KLHL41O60662 606 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 CD1EP15812 388 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 GRK2P25098 689 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 CDH5P33151 784 aaPredicted RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 MLH1P40692 756 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 ABCE1P61221 599 aaKnown RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 ZNF423Q2M1K9 1284 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 SNRNP48Q6IEG0 339 aaKnown RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 LRRC39Q96DD0 335 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 LENG8Q96PV6 779 aaPredicted RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 RMDN3Q96TC7 470 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 YIPF2Q9BWQ6 316 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 KLC2Q9H0B6 622 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 SDCBP2Q9H190 292 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 AGO2Q9UKV8 859 aaKnown RBP18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 KCNH4Q9UQ05 1017 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 RIPK3Q9Y572 518 aa18.15■□□□□ 0.5
CDKN1B-201ENST00000228872 CNTNAP2Q9UHC6 1331 aa18.14■□□□□ 0.5
CDKN1B-201ENST00000228872 CCNE2O96020 404 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 APRTP07741 180 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 HARS2P49590 506 aaKnown RBP18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 CNTN2Q02246 1040 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 C16orf72Q14CZ0 275 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 PTPN20Q4JDL3 420 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 C16orf89Q6UX73 402 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 EMC1Q8N766 993 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 GIPC3Q8TF64 312 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 TEX13BQ9BXU2 312 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 OXCT2Q9BYC2 517 aaPredicted RBP18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 MAN1C1Q9NR34 630 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 KCNN4O15554 427 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 CBFA2T3O75081 653 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 MIPP30301 263 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 NAA20P61599 178 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 GSTM4Q03013 218 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 PPIL2Q13356 520 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 TREML2Q5T2D2 321 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 ELMSAN1Q6PJG2 1045 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 MPP5Q8N3R9 675 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 FNIP1Q8TF40 1166 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 TFAP2BQ92481 460 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 CDRT15Q96T59 188 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 CGRRF1Q99675 332 aa18.14■□□□□ 0.49
CDKN1B-201ENST00000228872 XPO1O14980 1071 aaKnown RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 PRKCGP05129 697 aa18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 ZFXP17010 805 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 MSX2P35548 267 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 PDAP1Q13442 181 aaKnown RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 PDE1CQ14123 709 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 BNC2Q6ZN30 1099 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 MOB2Q70IA6 237 aa18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 TMEM102Q8N9M5 508 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 BHLHE22Q8NFJ8 381 aaPredicted RBP18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 ACMSDQ8TDX5 336 aa18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 OTUD5Q96G74 571 aa18.13■□□□□ 0.49
CDKN1B-201ENST00000228872 CEP170P1Q96L14 293 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms