RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PIAS2O75928 621 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 BBOX1O75936 387 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 C1QL1O75973 258 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 VNN1O95497 513 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 NBPF7P0C2Y1 421 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 VEGFAP15692 232 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 UQCRC1P31930 480 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 STT3AP46977 705 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 AIMP1Q12904 312 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC30Q5VVM6 783 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 PLAG1Q6DJT9 500 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 IL31Q6EBC2 164 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCSAPQ6IQ19 270 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 CAND1Q86VP6 1230 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 ADGRG3Q86Y34 549 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 WDR63Q8IWG1 891 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 LRRC71Q8N4P6 559 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 RNF152Q8N8N0 203 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 C8orf58Q8NAV2 365 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 RP9Q8TA86 221 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 SMCR8Q8TEV9 937 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 IQCDQ96DY2 449 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 RBM17Q96I25 401 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZBTB45Q96K62 511 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 FAM83DQ9H4H8 585 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 DUSP22Q9NRW4 184 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 USP22Q9UPT9 525 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 SPEF2Q9C093 1822 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 A0A1B0GUL6 1792 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 AQP7P3A6NL99 342 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 H0YIZ8 118 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 QSOX1O00391 747 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 AREL1O15033 823 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 MYL3P08590 195 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 TSHRP16473 764 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 ENGP17813 658 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 DRD4P21917 467 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 EPHA3P29320 983 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 EEFSECP57772 596 aaKnown RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 NANOS3P60323 173 aaKnown RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 STK3Q13188 491 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 PICALMQ13492 652 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 TBC1D25Q3MII6 688 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 MAP9Q49MG5 647 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 AARS2Q5JTZ9 985 aaKnown RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 RD3Q7Z3Z2 195 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 LIX1LQ8IVB5 337 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 C16orf71Q8IYS4 520 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC33Q8N5R6 958 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 TSPYL6Q8N831 410 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 VGLL2Q8N8G2 317 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC191Q8NCU4 936 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 DPCDQ9BVM2 203 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 COLEC11Q9BWP8 271 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 STARD7Q9NQZ5 370 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 ARPP21Q9UBL0 812 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 TRMT112Q9UI30 125 aaKnown RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 ADAM21Q9UKJ8 722 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 GABRQQ9UN88 632 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 DRG1Q9Y295 367 aaKnown RBP4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 ATP6V0A2Q9Y487 856 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 DUOX1Q9NRD9 1551 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 COL4A5P29400 1685 aa4.26□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF646O15015 1829 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 SCN9AQ15858 1988 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 ABCC4O15439 1325 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF521Q96K83 1311 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 CDHR2Q9BYE9 1310 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 LRRC3CA6NJW4 275 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PROP1O75360 226 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TJP3O95049 919 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 DDX58O95786 925 aaKnown RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PCCAP05165 728 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PRKCBP05771 671 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 HNRNPCP07910 306 aaKnown RBP eCLIP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 DLDP09622 509 aaKnown RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 HGFP14210 728 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GPD1P21695 349 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 FGFR2P21802 821 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GATMP50440 423 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 NEK3P51956 506 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 AK2P54819 239 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TPTEP56180 551 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TIRAPP58753 221 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TIAL1Q01085 375 aaKnown RBP eCLIP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GRAPQ13588 217 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 KCNAB1Q14722 419 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TWISTNBQ3B726 338 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PCID2Q5JVF3 399 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 RRAGBQ5VZM2 374 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 Q6ZWC4 215 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 DPP9Q86TI2 863 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms