RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 UCMAQ8WVF2 138 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 CPLX3Q8WVH0 158 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 NT5C3BQ969T7 300 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 WDCPQ9H6R7 721 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 METTL5Q9NRN9 209 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 FAM170AA1A519 330 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 F5H5T6 163 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 TIMM44O43615 452 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 TBL1XO60907 577 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 GZMAP12544 262 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 DESP17661 470 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 TACR2P21452 398 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 SDC4P31431 198 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 TIE1P35590 1138 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 PLA2G5P39877 138 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 KIR2DL1P43626 348 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 CXCR3P49682 368 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 MESP2Q0VG99 397 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 PTP4A2Q12974 167 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 DMC1Q14565 340 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 MS4A13Q5J8X5 152 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 NADSYN1Q6IA69 706 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 RFWD3Q6PCD5 774 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 TSSK4Q6SA08 328 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 ZNF571Q7Z3V5 609 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 ANKS1BQ7Z6G8 1248 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 CHSY1Q86X52 802 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 C3orf20Q8ND61 904 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 SYT11Q9BT88 431 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 ANP32EQ9BTT0 268 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 MMP17Q9ULZ9 603 aa17.91■□□□□ 0.46
SHKBP1-212ENST00000596163 MUC6Q6W4X9 2439 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 SIGLEC16A6NMB1 481 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 NPC1O15118 1278 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 TRIM24O15164 1050 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 SERPING1P05155 500 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 PDGFRAP16234 1089 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 HOXD9P28356 352 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 SLC6A4P31645 630 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 FLT3P36888 993 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 EIF4HQ15056 248 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 TSR1Q2NL82 804 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 RABGAP1LQ5R372 815 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 TTC39BQ5VTQ0 682 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 RAP1GAP2Q684P5 730 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 DNAJC24Q6P3W2 148 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 PKN3Q6P5Z2 889 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 MON1BQ7L1V2 547 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 PHLDB2Q86SQ0 1253 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 LGI2Q8N0V4 545 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 CCDC33Q8N5R6 958 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 WFIKKN2Q8TEU8 576 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 NELL1Q92832 810 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 TBCBQ99426 244 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 FAM86C1Q9NVL1 165 aa17.9■□□□□ 0.46
SHKBP1-212ENST00000596163 CCDC163A0A0D9SF12 145 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 K7ESF4 209 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 ZBTB24O43167 697 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 ALDH1A2O94788 518 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 KLF8O95600 359 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 SKILP12757 684 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 TDGF1P13385 188 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 CASP14P31944 242 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 CNR2P34972 360 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 RDXP35241 583 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 DGKEP52429 567 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 EMC10Q5UCC4 262 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 MFN1Q8IWA4 741 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 ALLCQ8N6M5 410 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 IL17RCQ8NAC3 791 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 TXNDC5Q8NBS9 432 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 ZBTB44Q8NCP5 570 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 TRIM11Q96F44 468 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 CFAP57Q96MR6 1250 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 TKTL2Q9H0I9 626 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 POLMQ9NP87 494 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 PIGVQ9NUD9 493 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 STIM2Q9P246 746 aa17.89■□□□□ 0.45
SHKBP1-212ENST00000596163 C2CD4BA6NLJ0 364 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 PRRT4C9JH25 899 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 PROB1E7EW31 1015 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 RTN2O75298 545 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 ENDOD1O94919 500 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 APBB3O95704 486 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 GYPCP04921 128 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 HNRNPLP14866 589 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 NTSR1P30989 418 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 PTPN9P43378 593 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 CRY1Q16526 586 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 ARL13BQ3SXY8 428 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 E4F1Q66K89 784 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 RNF43Q68DV7 783 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 DCUN1D2Q6PH85 259 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms