RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TARBP2Q15633 366 aaKnown RBP14.06□□□□□ -0.16
NDEL1-204ENST00000578172 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
NDEL1-204ENST00000578172 PQLC3Q8N755 202 aa14.06□□□□□ -0.16
NDEL1-204ENST00000578172 HTR3CQ8WXA8 447 aa14.06□□□□□ -0.16
NDEL1-204ENST00000578172 RHOBTB2Q9BYZ6 727 aa14.06□□□□□ -0.16
NDEL1-204ENST00000578172 SIPA1L1O43166 1804 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 CASTOR2A6NHX0 329 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 EEF2KO00418 725 aaKnown RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 GRIK4Q16099 956 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 PIGZQ86VD9 579 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 MTMR14Q8NCE2 650 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 RNF217Q8TC41 542 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 TNFSF13BQ9Y275 285 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 SLC15A5A6NIM6 579 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 B4GALT4O60513 344 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 CSPG5O95196 566 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 ATP6V1B1P15313 513 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 SLC1A6P48664 564 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 OAZ1P54368 228 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 RIPK1Q13546 671 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 CERCAMQ5T4B2 595 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 TSHZ1Q6ZSZ6 1077 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 CAND1Q86VP6 1230 aaKnown RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 CMASQ8NFW8 434 aaPredicted RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 LPPQ93052 612 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 HFE2Q6ZVN8 426 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 APPL2Q8NEU8 664 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 KCTD15Q96SI1 283 aaPredicted RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 XPNPEP3Q9NQH7 507 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 RHBDL2Q9NX52 303 aa14.05□□□□□ -0.16
NDEL1-204ENST00000578172 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
NDEL1-204ENST00000578172 BRCA2P51587 3418 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 BUD23O43709 281 aaKnown RBP14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TCEA3O75764 348 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 AMHP03971 560 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 CCNB1P14635 433 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TGM2P21980 687 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TPI1P60174 286 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 MAP7Q14244 749 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 SPATA24Q86W54 205 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 VCX3BQ9H321 246 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TMEM216Q9P0N5 145 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TLK1Q9UKI8 766 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 PLLPQ9Y342 182 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 TEX264Q9Y6I9 313 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 NUP205Q92621 2012 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 CCL22O00626 93 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 NUDT2P50583 147 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
NDEL1-204ENST00000578172 ANO7Q6IWH7 933 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 FAM156AQ8NDB6 213 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.04□□□□□ -0.16
NDEL1-204ENST00000578172 CSPG4P5Q96PW8 444 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 PHACTR1Q9C0D0 580 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 IL1RL2Q9HB29 575 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 PPP1R15BQ5SWA1 713 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 SYPL2Q5VXT5 272 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 WSCD1Q658N2 575 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 RPS27LQ71UM5 84 aaKnown RBP14.04□□□□□ -0.16
NDEL1-204ENST00000578172 HPS6Q86YV9 775 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 SCN4BQ8IWT1 228 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 P2RY11Q96G91 374 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 POPDC2Q9HBU9 364 aa14.04□□□□□ -0.16
NDEL1-204ENST00000578172 CYP2B6P20813 491 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 EPHA3P29320 983 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 ZNF280AP59817 542 aaPredicted RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 IRF9Q00978 393 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 ZSCAN18Q8TBC5 510 aaPredicted RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 APBA2Q99767 749 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 FZD8Q9H461 694 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 SNUPNO95149 360 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 RALBP11234 206 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 ALADP13716 330 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 PAPOLAP51003 745 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 CLDN10P78369 228 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 SLC34A1Q06495 639 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 USP10Q14694 798 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 FBXO48Q5FWF7 155 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 SNRNP27Q8WVK2 155 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 EBNA1BP2Q99848 306 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 USP29Q9HBJ7 922 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 BFARQ9NZS9 450 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 PEX1O43933 1283 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 HMBSP08397 361 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 DLDP09622 509 aaKnown RBP14.03□□□□□ -0.16
NDEL1-204ENST00000578172 TGFB3P10600 412 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 TKTL1P51854 596 aa14.03□□□□□ -0.16
NDEL1-204ENST00000578172 CACNA2D1P54289 1103 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms