RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 H0Y3Z8 333 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 KCNN4O15554 427 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 DIAPH2O60879 1101 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 USP2O75604 605 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 TMEM63AO94886 807 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 CBX6O95503 412 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ASMTLO95671 621 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TGFB3P10600 412 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 ELK3P41970 407 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 RAD23BP54727 409 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 GPX6P59796 221 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 PTSQ03393 145 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 INPP5AQ14642 412 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 KLHL38Q2WGJ6 581 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 SNAP47Q5SQN1 464 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ACBD5Q5T8D3 534 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 CGB2Q6NT52 195 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 BBS12Q6ZW61 710 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 AFAP1L2Q8N4X5 818 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 SLC35B2Q8TB61 432 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TCP10LQ8TDR4 215 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 THAP3Q8WTV1 239 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 ZNF837Q96EG3 531 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 TMEM176AQ96HP8 235 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MMP19Q99542 508 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 GPR20Q99678 358 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 APOL6Q9BWW8 343 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ELOVL4Q9GZR5 314 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 XYLT2Q9H1B5 865 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 WDR35Q9P2L0 1181 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ACTL7BQ9Y614 415 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 NDC80O14777 642 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 LPXNO60711 386 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 AVILO75366 819 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ANP32DO95626 131 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ZBED1O96006 694 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 APRTP07741 180 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 INSRRP14616 1297 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 BCAR1P56945 870 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RNASELQ05823 741 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 MGAT5Q09328 741 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RAB6CQ53S08 254 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 BSPRYQ5W0U4 402 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 DRICH1Q6PGQ1 229 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 C12orf29Q8N999 325 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ST13P5Q8NFI4 369 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
VAPA-203ENST00000577539 PPP1R13LQ8WUF5 828 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 NSMCE1Q8WV22 266 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ZNF75CPQ92670 426 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 DCPSQ96C86 337 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 RSRC1Q96IZ7 334 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 CLMNQ96JQ2 1002 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 LPIN3Q9BQK8 851 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RAB6CQ9H0N0 254 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SDCBP2Q9H190 292 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SMARCAD1Q9H4L7 1026 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 GPRC5DQ9NZD1 345 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SLC24A2Q9UI40 661 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SNCAIPQ9Y6H5 919 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 LOXHD1Q8IVV2 1947 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 DOCK5Q9H7D0 1870 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CLUHO75153 1309 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RBBP6Q7Z6E9 1792 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 IGKV6D-21A0A0A0MT36 114 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 KBTBD13C9JR72 458 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 E5RJQ4 531 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 HBP1O60381 514 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 DCTN3O75935 186 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 OAS1P00973 400 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 DESP17661 470 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 GPD1P21695 349 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 GCAP28676 217 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ZNF157P51786 506 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 NDST1P52848 882 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 IRX4P78413 519 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RPL6Q02878 288 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 TMEM62Q0P6H9 643 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 TFDP2Q14188 446 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 TMEM132DQ14C87 1099 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CELF3Q5SZQ8 465 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 C1QTNF12Q5T7M4 302 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 NLRP9Q7RTR0 991 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SESTD1Q86VW0 696 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 XYLT1Q86Y38 959 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 MAP7D3Q8IWC1 876 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ARFGAP1Q8N6T3 406 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 FAM111AQ96PZ2 611 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RAB3IPQ96QF0 476 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 CYTH2Q99418 400 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 RNPEPQ9H4A4 650 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RSAD1Q9HA92 442 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 NOP53Q9NZM5 478 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 SLC17A7Q9P2U7 560 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SIX4Q9UIU6 781 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ZFP69BQ9UJL9 534 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms