RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DENND2CQ68D51 928 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 CCDC25Q86WR0 208 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 RELL1Q8IUW5 271 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 ZNF276Q8N554 614 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 TTC9BQ8N6N2 239 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 TFB1MQ8WVM0 346 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 CASP10Q92851 521 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 CLSTN3Q9BQT9 956 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 FRMD8Q9BZ67 464 aaPredicted RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 UBE2OQ9C0C9 1292 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 PHACTR1Q9C0D0 580 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 MTIF3Q9H2K0 278 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 USP29Q9HBJ7 922 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.24□□□□□ -0.133e-7■■■□□ 15.3
TPM1-215ENST00000558868 DONSONQ9NYP3 566 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 DTLQ9NZJ0 730 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 FNIP2Q9P278 1114 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 MYO16Q9Y6X6 1858 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 RANBP2P49792 3224 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 FGF10O15520 208 aaPredicted RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 ADAM12O43184 909 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 APOEP02649 317 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 ZDHHC11BP0C7U3 371 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 ETS1P14921 441 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 ERCC2P18074 760 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 MX2P20592 715 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 RBL1P28749 1068 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 GDF10P55107 478 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 TBX4P57082 545 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 IFFO1Q0D2I5 559 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 VEPH1Q14D04 833 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 TRIP4Q15650 581 aaPredicted RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 UAP1Q16222 522 aaPredicted RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 RNASEH2BQ5TBB1 312 aaKnown RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 HEATR6Q6AI08 1181 aaKnown RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 VPS52Q8N1B4 723 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 ATP6V0D2Q8N8Y2 350 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 GLIS1Q8NBF1 620 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 GIPC2Q8TF65 315 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 BADQ92934 168 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 C1orf74Q96LT6 269 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 OLFM3Q96PB7 478 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 MAGEB5Q9BZ81 275 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 ADAM7Q9H2U9 754 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 CRISPLD1Q9H336 500 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 CATSPERBQ9H7T0 1116 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 SFMBT1Q9UHJ3 866 aa14.23□□□□□ -0.13
TPM1-215ENST00000558868 KIAA0100Q14667 2235 aaKnown RBP14.23□□□□□ -0.13
TPM1-215ENST00000558868 C5orf60A6NFR6 353 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 AGPSO00116 658 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TP73O15350 636 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 EIF3HO15372 352 aaKnown RBP eCLIP14.22□□□□□ -0.13
TPM1-215ENST00000558868 MTSS1O43312 755 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 PAGE1O75459 146 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 GCATO75600 419 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 SOAT2O75908 522 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 NUDT17P0C025 328 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 RPL17P18621 184 aaKnown RBP14.22□□□□□ -0.13
TPM1-215ENST00000558868 ATF6P18850 670 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 EPHB2P29323 1055 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 PPP3CCP48454 512 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 COG7P83436 770 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 SLC10A2Q12908 348 aaPredicted RBP14.22□□□□□ -0.13
TPM1-215ENST00000558868 PLD1Q13393 1074 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TAF12Q16514 161 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 C10orf120Q5SQS8 335 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 CENPUQ71F23 418 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TMCO2Q7Z6W1 182 aaPredicted RBP14.22□□□□□ -0.13
TPM1-215ENST00000558868 LZTR1Q8N653 840 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 STKLD1Q8NE28 680 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 GPR152Q8TDT2 470 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TBC1D31Q96DN5 1066 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 SLC39A13Q96H72 371 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TTC25Q96NG3 672 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 RAD9AQ99638 391 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 KLC2Q9H0B6 622 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 ANLNQ9NQW6 1124 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 TMPRSS4Q9NRS4 437 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 ETNK2Q9NVF9 386 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 OSER1Q9NX31 292 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 MARCH2Q9P0N8 246 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
TPM1-215ENST00000558868 VCANP13611 3396 aa14.22□□□□□ -0.13
TPM1-215ENST00000558868 FAM72CH0Y354 149 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 H3BQF6 201 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 PRRG1O14668 218 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 CHADO15335 359 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 MFSD11O43934 449 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 FGF18O76093 207 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 LRIG2O94898 1065 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 MYZAPP0CAP1 466 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 ARL4CP56559 192 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms