RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 USP12O75317 370 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 CYP2B6P20813 491 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 PSMB4P28070 264 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 HOXC8P31273 242 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MAGEA6P43360 314 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 TAF6P49848 677 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 AFF1P51825 1210 aaKnown RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 IRF5Q13568 498 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FAM72AQ5TYM5 149 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FAM72DQ6L9T8 149 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 DSTYKQ6XUX3 929 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FAM72BQ86X60 149 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 NUDCD3Q8IVD9 361 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MCUQ8NE86 351 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FBXO27Q8NI29 283 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 E2F7Q96AV8 911 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 SKA1Q96BD8 255 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 PTCD3Q96EY7 689 aaKnown RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 NMUR2Q9GZQ4 415 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 ANLNQ9NQW6 1124 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MRPL42Q9Y6G3 142 aaKnown RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MYADML2A6NDP7 307 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 M0QYT0 321 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 KCNK1O00180 336 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 RNF103O00237 685 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FCHO1O14526 889 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 DGKIO75912 1065 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 IGHA2P01877 340 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 ARL4AP40617 200 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MATKP42679 507 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 CRYBB1P53674 252 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 CLNS1AP54105 237 aaKnown RBP11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 WSCD1Q658N2 575 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 B3GALNT2Q8NCR0 500 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 P2RY11Q96G91 374 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 ATXN7L3BQ96GX2 97 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 AGAP3Q96P47 875 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 MED10Q9BTT4 135 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 SNX10Q9Y5X0 201 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 C17orf102A2RUQ5 167 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 NRP1O14786 923 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 HUS1O60921 280 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 KRT38O76015 456 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 RARBP10826 455 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 ABCG1P45844 678 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 CPT1AP50416 773 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SESN3P58005 492 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 LILRA4P59901 499 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SEMA5AQ13591 1074 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PIGVQ9NUD9 493 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SYBUQ9NX95 663 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 ZNF180Q9UJW8 692 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 BRCA2P51587 3418 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 ZNF487B1APH4 448 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 TPSB2P20231 275 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SCNN1AP37088 669 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 MLH1P40692 756 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PNPLA4P41247 253 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SNX16P57768 344 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 TPSAB1Q15661 275 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SLC25A52Q3SY17 297 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SV2CQ496J9 727 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PPM1JQ5JR12 505 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 LGSNQ5TDP6 509 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 RASAL3Q86YV0 1011 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 TREML1Q86YW5 311 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 ZNF398Q8TD17 642 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 RNF139Q8WU17 664 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 NSL1Q96IY1 281 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 KCNK16Q96T55 309 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 RHOBTB2Q9BYZ6 727 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
C11orf54-214ENST00000540113 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
C11orf54-214ENST00000540113 TSC2P49815 1807 aa11.85□□□□□ -0.51
C11orf54-214ENST00000540113 MANSC4A6NHS7 340 aaPredicted RBP11.85□□□□□ -0.51
C11orf54-214ENST00000540113 I3L4J1 428 aa11.85□□□□□ -0.51
C11orf54-214ENST00000540113 I6L893 689 aaPredicted RBP11.85□□□□□ -0.51
C11orf54-214ENST00000540113 ITM2AO43736 263 aa11.85□□□□□ -0.51
C11orf54-214ENST00000540113 ENO1P06733 434 aaKnown RBP11.85□□□□□ -0.51
C11orf54-214ENST00000540113 ERVK-10P10266 1014 aa11.85□□□□□ -0.51
C11orf54-214ENST00000540113 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
C11orf54-214ENST00000540113 WARSP23381 471 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms