RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 USP39Q53GS9 565 aaKnown RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 KBTBD6Q86V97 674 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 KIAA2013Q8IYS2 634 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 HJURPQ8NCD3 748 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 ZNF397Q8NF99 534 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 CPA5Q8WXQ8 436 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 RNF34Q969K3 372 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 ERLEC1Q96DZ1 483 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 PRICKLE1Q96MT3 831 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 IRX2Q9BZI1 471 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 XPO7Q9UIA9 1087 aaKnown RBP24.93■■□□□ 1.58
CPNE1-223ENST00000475146 INVSQ9Y283 1065 aa24.93■■□□□ 1.58
CPNE1-223ENST00000475146 GABRB2P47870 512 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 RNASE9P60153 205 aaKnown RBP24.92■■□□□ 1.58
CPNE1-223ENST00000475146 ARID5AQ03989 594 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 EIF4HQ15056 248 aaKnown RBP24.92■■□□□ 1.58
CPNE1-223ENST00000475146 FILIP1LQ4L180 1135 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 MPP7Q5T2T1 576 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 FAM102AQ5T9C2 384 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-223ENST00000475146 CHSY1Q86X52 802 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 ATP6V0D2Q8N8Y2 350 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 BTN2A3PQ96KV6 586 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.92■■□□□ 1.58
CPNE1-223ENST00000475146 ELOVL2Q9NXB9 296 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 SLC12A6Q9UHW9 1150 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 EML5Q05BV3 1969 aa24.92■■□□□ 1.58
CPNE1-223ENST00000475146 EP300Q09472 2414 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-223ENST00000475146 GOLGA8SH3BPF8 625 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 DCLK1O15075 740 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 ZBTB24O43167 697 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-223ENST00000475146 TEX33O43247 280 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 RETP07949 1114 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 SLC2A3P11169 496 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 HLA-FP30511 346 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 NOS2P35228 1153 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 FMO1Q01740 532 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 NME3Q13232 169 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 C2CD6Q53TS8 623 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 MS4A13Q5J8X5 152 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 RAP1GAP2Q684P5 730 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 XYLT1Q86Y38 959 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 WFIKKN2Q8TEU8 576 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 GABRG3Q99928 467 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 RTN4Q9NQC3 1192 aaKnown RBP24.91■■□□□ 1.58
CPNE1-223ENST00000475146 ABCB8Q9NUT2 735 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 RAD54BQ9Y620 910 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 STON1Q9Y6Q2 735 aa24.91■■□□□ 1.58
CPNE1-223ENST00000475146 PABPC1P11940 636 aaKnown RBP24.9■■□□□ 1.58
CPNE1-223ENST00000475146 CHRNB2P17787 502 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 ABCB4P21439 1286 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 CCR1P32246 355 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 MATKP42679 507 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 RPS24P62847 133 aaKnown RBP24.9■■□□□ 1.58
CPNE1-223ENST00000475146 IQCB1Q15051 598 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 TRIM72Q6ZMU5 477 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 CHST9Q7L1S5 443 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 MFN1Q8IWA4 741 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 LGI2Q8N0V4 545 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 SORCS1Q8WY21 1168 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 MYEOVQ96EZ4 313 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.9■■□□□ 1.58
CPNE1-223ENST00000475146 GGA2Q9UJY4 613 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 STAP1Q9ULZ2 295 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 USP18Q9UMW8 372 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 USP34Q70CQ2 3546 aa24.9■■□□□ 1.58
CPNE1-223ENST00000475146 A0A1W2PQF6 199 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 WASH3PC4AMC7 463 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 M0QYT0 321 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 NPC1O15118 1278 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 TACR2P21452 398 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 SCNN1AP37088 669 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 SULT1E1P49888 294 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 TPM4P67936 248 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 SPEM2Q0P670 501 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 EIF4EBP2Q13542 120 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-223ENST00000475146 E2F5Q15329 346 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 ELF2Q15723 593 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 KIAA1211LQ6NV74 962 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 MMS22LQ6ZRQ5 1243 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 CCDC117Q8IWD4 279 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-223ENST00000475146 AHI1Q8N157 1196 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 CFAP52Q8N1V2 620 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 CARNMT1Q8N4J0 409 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 ZNF557Q8N988 423 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-223ENST00000475146 WFDC5Q8TCV5 224 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 SPACA7Q96KW9 195 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 CBX8Q9HC52 389 aa24.89■■□□□ 1.58
CPNE1-223ENST00000475146 THAP10Q9P2Z0 257 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-223ENST00000475146 KCNU1A8MYU2 1149 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 F5H5T6 163 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 TIMM44O43615 452 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 CYP1A1P04798 512 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-223ENST00000475146 GABRG2P18507 467 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 IL12RB1P42701 662 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 CDH18Q13634 790 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 ZNF234Q14588 700 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 STARD3Q14849 445 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 PLK5Q496M5 336 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 TMEM215Q68D42 235 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 C11orf74Q86VG3 221 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms