RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 HSP90AA5PQ58FG0 334 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 RARS2Q5T160 578 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 GPAT2Q6NUI2 795 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 TICAM1Q8IUC6 712 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 CLVS1Q8IUQ0 354 aaPredicted RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 ZNF781Q8N8C0 355 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ATP6V1E2Q96A05 226 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 RANBP9Q96S59 729 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 HAPLN2Q9GZV7 340 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 EPS15L1Q9UBC2 864 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ITGA11Q9UKX5 1188 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 TCRBV5S1A1TA0A578 114 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 KDELR1P24390 212 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KLF10Q13118 480 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 C9orf131Q5VYM1 1079 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KCNT2Q6UVM3 1135 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 MAP4K3Q8IVH8 894 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 SNX31Q8N9S9 440 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KBTBD7Q8WVZ9 684 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PRMT6Q96LA8 375 aaPredicted RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 SLC29A1Q99808 456 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 NAA50Q9GZZ1 169 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 GPATCH2LQ9NWQ4 482 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 H7C0C1 242 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 K7EPI3 171 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TPP1O14773 563 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 SPTLC1O15269 473 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PMM2O15305 246 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CAPN15O75808 1086 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 ALDOAP04075 364 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 ATP5OP48047 213 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 GTF2A2P52657 109 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PSMC1P62191 440 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 C1QBPQ07021 282 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 ZACNQ401N2 412 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 IL23RQ5VWK5 629 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PPP1R2P3Q6NXS1 205 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 BBS12Q6ZW61 710 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 GPD1LQ8N335 351 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 SLC16A10Q8TF71 515 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 ATP2A3Q93084 1043 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 AKT1S1Q96B36 256 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CYP26B1Q9NR63 512 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TRNAU1APQ9NX07 287 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 NYAP2Q9P242 653 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CYTH4Q9UIA0 394 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 HES2Q9Y543 173 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KANSL1LA0AUZ9 987 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 SLC15A5A6NIM6 579 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KCNN4O15554 427 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PRKCGP05129 697 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 GNAO1P09471 354 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PSMC3P17980 439 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 CXCL9Q07325 125 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TBCCQ15814 346 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CES3Q6UWW8 571 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 C15orf39Q6ZRI6 1047 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 CMC1Q7Z7K0 106 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 RAVER1Q8IY67 606 aaKnown RBP8.17□□□□□ -1.1
TPM3-215ENST00000469717 LZTR1Q8N653 840 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 KCTD6Q8NC69 237 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 NLRP7Q8WX94 980 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 IRGQQ8WZA9 623 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 RCN3Q96D15 328 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 PCDHAC1Q9H158 963 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 COQ10BQ9H8M1 238 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 GGA3Q9NZ52 723 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 RAB26Q9ULW5 256 aa8.17□□□□□ -1.1
TPM3-215ENST00000469717 TMEM247A6NEH6 219 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 MCF2LO15068 1137 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 KLHL2O95198 593 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 ATE1O95260 518 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CLIC3O95833 236 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 GRM5P41594 1212 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CDO1Q16878 200 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 Q3C1V9 767 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 ERI1Q8IV48 349 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 DSELQ8IZU8 1212 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 FBXL18Q96ME1 805 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 PEBP4Q96S96 227 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 ACO2Q99798 780 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 ZNF341Q9BYN7 854 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 MAGEB5Q9BZ81 275 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 Q9H521 79 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 NRDE2Q9H7Z3 1164 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 GMPR2Q9P2T1 348 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 ARHGAP26Q9UNA1 814 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 A0A1W2PPW3 197 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms