RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FRMD8Q9BZ67 464 aaPredicted RBP12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ITGA11Q9UKX5 1188 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 KLHL2O95198 593 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 PYGLP06737 847 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 VAV1P15498 845 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 SERPINB9P50453 376 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 NIPAL4Q0D2K0 466 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 CBLBQ13191 982 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 SURF1Q15526 300 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 UGT2A3Q6UWM9 527 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 TIFABQ6ZNK6 161 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 MAP7D3Q8IWC1 876 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ARHGAP18Q8N392 663 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 AGBL3Q8NEM8 1001 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 CLEC4CQ8WTT0 213 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 LRRC39Q96DD0 335 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 PGBD4Q96DM1 585 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 PPP1R36Q96LQ0 422 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 RPF1Q9H9Y2 349 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 IFT122Q9HBG6 1241 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 BPTFQ12830 3046 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 PABPC4LP0CB38 370 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SMIM18P0DKX4 95 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 MGAT1P26572 445 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ICAM3P32942 547 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 MSX2P35548 267 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ABCG1P45844 678 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GTF2A2P52657 109 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 HDAC4P56524 1084 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 FOLH1Q04609 750 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 LSAMPQ13449 338 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GK3PQ14409 553 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GRM2Q14416 872 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PDK2Q15119 407 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 STILQ15468 1287 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SLC9B1Q4ZJI4 515 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 TSHZ1Q6ZSZ6 1077 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 MAPK15Q8TD08 544 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GBA2Q9HCG7 927 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ADAMTS5Q9UNA0 930 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SORCS3Q9UPU3 1222 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GLRA3O75311 464 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GABBR2O75899 941 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SERPINE1P05121 402 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 CLCN3P51790 818 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 TLR1Q15399 786 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 OLFML1Q6UWY5 402 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 NAPRTQ6XQN6 538 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 TMC7Q7Z402 723 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SPATA24Q86W54 205 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PLD6Q8N2A8 252 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ZNF781Q8N8C0 355 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 FLAD1Q8NFF5 587 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 APBB2Q92870 758 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 DNAJC1Q96KC8 554 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 MIS12Q9H081 205 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 DHX35Q9H5Z1 703 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ATP5BP06576 529 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ITGA2BP08514 1039 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 ERVK-10P10266 1014 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 VDRP11473 427 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PTPRAP18433 802 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 TPSB2P20231 275 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 TPSAB1Q15661 275 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PDCD2Q16342 344 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 IER5Q5VY09 327 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 PYROXD2Q8N2H3 581 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 FBXW8Q8N3Y1 598 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 VCX3AQ9NNX9 186 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 FAM49BQ9NUQ9 324 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 DNAJC28Q9NX36 388 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 MTMR10Q9NXD2 777 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 UBAP1Q9NZ09 502 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 COPG2Q9UBF2 871 aa12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 G3BP2Q9UN86 482 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-203ENST00000462146 GOLGA8QA0A0J9YX86 632 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 GOLGA8OA6NCC3 632 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 GOLGA8NF8WBI6 632 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 GCATO75600 419 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 RALBP11234 206 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 COX4I1P13073 169 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms