RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CIITAP33076 1130 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 THPOP40225 353 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 PBX3P40426 434 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 GSTM5P46439 218 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 EIF3BP55884 814 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 TIRAPP58753 221 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MC2RQ01718 297 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 TAP2Q03519 686 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF844Q08AG5 666 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 TMEM115Q12893 351 aaPredicted RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 PRPF4BQ13523 1007 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 KCNJ12Q14500 433 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 P3H1Q32P28 736 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF792Q3KQV3 632 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ERMARDQ5T6L9 678 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 RGS7BPQ6MZT1 257 aaPredicted RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 TATDN1Q6P1N9 297 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF449Q6P9G9 518 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 KLHL35Q6PF15 583 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 KIAA1324Q6UXG2 1013 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 SLC30A10Q6XR72 485 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 THNSL1Q8IYQ7 743 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 FAM109AQ8N4B1 249 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 TNIP2Q8NFZ5 429 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MZB1Q8WU39 189 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ARHGEF2Q92974 986 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 KIF1BPQ96EK5 621 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MARS2Q96GW9 593 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 C5orf34Q96MH7 638 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 VN1R3Q9BXE9 311 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MAK16Q9BXY0 300 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 L2HGDHQ9H9P8 463 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 SCPEP1Q9HB40 452 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 SLC22A11Q9NSA0 550 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MRPL15Q9P015 296 aaKnown RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 HSFX1Q9UBD0 423 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF70Q9UC06 446 aaPredicted RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 MBD1Q9UIS9 605 aaPredicted RBP5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 CDH22Q9UJ99 828 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 SUFUQ9UMX1 484 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 ADAM18Q9Y3Q7 739 aa5.66□□□□□ -1.5
TM9SF3-202ENST00000443638 A0A1W2PQF6 199 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 GLOD5A6NK44 160 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ZAR1LA6NP61 321 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 MATN2O00339 956 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SYN3O14994 580 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 AFPP02771 609 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 CFIP05156 583 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 C1SP09871 688 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SPATA31D3P0C874 917 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SELLP14151 372 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ADORA2AP29274 412 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 EEF1DP29692 281 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 PPARGP37231 505 aaPredicted RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 MVDP53602 400 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 TNFAIP1Q13829 316 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 E2F2Q14209 437 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 CRYMQ14894 314 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 PCLAFQ15004 111 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ARHGAP40Q5TG30 622 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 METRNLQ641Q3 311 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ADALQ6DHV7 355 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 EFCAB12Q6NXP0 572 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SPATA31D4Q6ZUB0 917 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 GPR149Q86SP6 731 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 GLRX5Q86SX6 157 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 EPHX4Q8IUS5 362 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 LINC00346Q8IVM7 164 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ABRAQ8N0Z2 381 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 C11orf44Q8N8P7 122 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 INTS12Q96CB8 462 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ABHD1Q96SE0 405 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SPATA25Q9BR10 227 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 HGH1Q9BTY7 390 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 HTATIP2Q9BUP3 242 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SMARCAD1Q9H4L7 1026 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 AGO3Q9H9G7 860 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SPATS2LQ9NUQ6 558 aaKnown RBP5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 FBXO28Q9NVF7 368 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 ALKBH4Q9NXW9 302 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 EHD2Q9NZN4 543 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 RASAL2Q9UJF2 1139 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 RAB21Q9UL25 225 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 SORCS3Q9UPU3 1222 aa5.65□□□□□ -1.5
TM9SF3-202ENST00000443638 C16orf96A6NNT2 1141 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 KIAA1324LA8MWY0 1029 aaPredicted RBP5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 GCOM1H8Y6P7 765 aaPredicted RBP5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 GRM8O00222 908 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 FAM200BP0CF97 657 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 ITGALP20701 1170 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 DRD1P21728 446 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 KRT2P35908 639 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 CHN2P52757 468 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 OLR1P78380 273 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 TLE3Q04726 772 aa5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 RNASELQ05823 741 aaKnown RBP5.64□□□□□ -1.51
TM9SF3-202ENST00000443638 DLX2Q07687 328 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms