RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 VCPKMTQ9H867 229 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 HEY2Q9UBP5 337 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
SHANK3-202ENST00000414786 BMP10O95393 424 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 HNMTP50135 292 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 RAD51AP1Q96B01 352 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 FEM1CQ96JP0 617 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 FAM153AQ9UHL3 310 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 MFN2O95140 757 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 GPR156Q8NFN8 814 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 NMD3Q96D46 503 aaKnown RBP18.89■□□□□ 0.61
SHANK3-202ENST00000414786 THAP2Q9H0W7 228 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 PDHXO00330 501 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 PDXKO00764 312 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 FFAR2O15552 330 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 ARL3P36405 182 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 BARGINQ6ZT62 677 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 ALLCQ8N6M5 410 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 LPAR1Q92633 364 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 ANKDD1BA6NHY2 528 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 PNPLA4P41247 253 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 TBX4P57082 545 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 GRB14Q14449 540 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 GPR152Q8TDT2 470 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 TRAPPC12Q8WVT3 735 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 MAML3Q96JK9 1138 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 MYL12AP19105 171 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 ITIH2P19823 946 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 TUBP50607 506 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 NECTIN1Q15223 517 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 FOXP3Q9BZS1 431 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 TBX20Q9UMR3 447 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 VPS9D1Q9Y2B5 631 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 STK4Q13043 487 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 SLC30A9Q6PML9 568 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 SPATA20Q8TB22 786 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 NDRG2Q9UN36 371 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 CXCL8P10145 99 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 MDH1P40925 334 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 CUL2Q13617 745 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 PTPN20Q4JDL3 420 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 CBWD6Q4V339 395 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 EPS8L3Q8TE67 593 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 WDR24Q96S15 920 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 CDADC1Q9BWV3 514 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 PIK3R1P27986 724 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 SERPINB8P50452 374 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 NUP107P57740 925 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 RAP1GAP2Q684P5 730 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 COLGALT1Q8NBJ5 622 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 FAM50BQ9Y247 325 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 IGSF9BQ9UPX0 1349 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 GUF1Q8N442 669 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 ENGASEQ8NFI3 743 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 CIDEBQ9UHD4 219 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 MTO1Q9Y2Z2 717 aaKnown RBP18.88■□□□□ 0.61
SHANK3-202ENST00000414786 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 H7C1W4 665 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 SEC13P55735 322 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 PUDPQ08623 228 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 OVOS1Q6IE37 1185 aa18.88■□□□□ 0.61
SHANK3-202ENST00000414786 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 ISM1B1AKI9 464 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 ABCG1P45844 678 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 SEMA6AQ9H2E6 1030 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 NOL6Q9H6R4 1146 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 AHSPQ9NZD4 102 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 OASLQ15646 514 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 KLHL12Q53G59 568 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 VANGL2Q9ULK5 521 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 BTBD3Q9Y2F9 522 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 ATXN2Q99700 1313 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 MYL12BO14950 172 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 MC1RQ01726 317 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 PKN2Q16513 984 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 PCSK9Q8NBP7 692 aaKnown RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 SMPDL3BQ92485 455 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 GAL3ST3Q96A11 431 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 SYT15Q9BQS2 421 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 VPS51Q9UID3 782 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 RBAK-RBAKDNI3L0D1 243 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 INPP4BO15327 924 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 PRG2P13727 222 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 CYP2R1Q6VVX0 501 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 RASSF6Q6ZTQ3 369 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 GET4Q7L5D6 327 aaPredicted RBP18.87■□□□□ 0.61
SHANK3-202ENST00000414786 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 MID1IP1Q9NPA3 183 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 MCUBQ9NWR8 336 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 ADGRG1Q9Y653 693 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 LOC100506127A0A0U1RQW1 187 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 XYLBO75191 536 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 CYP2C8P10632 490 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 BDNFP23560 247 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 SLC29A2Q14542 456 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 DNAJC9Q8WXX5 260 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms