RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RRAGAQ7L523 313 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 RAB11FIP2Q7L804 512 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 C2CD5Q86YS7 1000 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 LNX2Q8N448 690 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 SUPT20HQ8NEM7 779 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 IL17REQ8NFR9 667 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 SOCS4Q8WXH5 440 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ASB10Q8WXI3 467 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 USP13Q92995 863 aaPredicted RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 R3HDM4Q96D70 268 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 TRAPPC9Q96Q05 1148 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 PYM1Q9BRP8 204 aaKnown RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 SEPSECSQ9HD40 501 aaKnown RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 PDP2Q9P2J9 529 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ZNF69Q9UC07 566 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 TESQ9UGI8 421 aaKnown RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 STEAP1Q9UHE8 339 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FZD1Q9UP38 647 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 INSRP06213 1382 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 ADGRA2Q96PE1 1338 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 A0A0G2JLW4 131 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 H0Y3Z8 333 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 PPP6R2O75170 966 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 RPP40O75818 363 aaKnown RBP6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 WDR47O94967 919 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 FESP07332 822 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 ITGAMP11215 1152 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 LIPAP38571 399 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 PBX1P40424 430 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 ADAM17P78536 824 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 MTAPQ13126 283 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 TMEM196Q5HYL7 178 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 TREML2Q5T2D2 321 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 JAKMIP3Q5VZ66 844 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 TMED8Q6PL24 325 aaPredicted RBP6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 RNF207Q6ZRF8 634 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 HERC6Q8IVU3 1022 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 ARHGEF19Q8IW93 802 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 TEX19Q8NA77 164 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 OR6Y1Q8NGX8 325 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 CSGALNACT1Q8TDX6 532 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 AFG1LQ8WV93 481 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 PLEKHG4BQ96PX9 1271 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 VPS16Q9H269 839 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 ELAC1Q9H777 363 aaKnown RBP6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 MON2Q7Z3U7 1717 aa6.36□□□□□ -1.39
RNU4-39P-201ENST00000362455 RTL1A6NKG5 1358 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 PCDH11XQ9BZA7 1347 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 PCDH11YQ9BZA8 1340 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 CER1O95813 267 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 PRKCBP05771 671 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 MMP10P09238 476 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 JUPP14923 745 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 CD19P15391 556 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 CNTFP26441 200 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 ZEB1P37275 1124 aaPredicted RBP6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM110CQ1W6H9 321 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 P3H1Q32P28 736 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 TEDDM1Q5T9Z0 273 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 MSANTD2Q6P1R3 559 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 LRRTM4Q86VH4 590 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 SIMC1Q8NDZ2 872 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 CACTINQ8WUQ7 758 aaKnown RBP6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 LENG9Q96B70 501 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 C3orf49Q96BT1 292 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 PGBD1Q96JS3 809 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 BRD8Q9H0E9 1235 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 RIC8AQ9NPQ8 531 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 TRIM36Q9NQ86 728 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 KCTD5Q9NXV2 234 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 GGA3Q9NZ52 723 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 DKK3Q9UBP4 350 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 NKX1-2Q9UD57 310 aaPredicted RBP6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 C19orf53Q9UNZ5 99 aaPredicted RBP6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 CNTN6Q9UQ52 1028 aa6.35□□□□□ -1.39
RNU4-39P-201ENST00000362455 NSD3Q9BZ95 1437 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 A0A1B0GVC2 190 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 VWC2LB2RUY7 222 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 KIF28PB7ZC32 967 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 EYA2O00167 538 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 PSMD9O00233 223 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 YY2O15391 372 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 FOXD2O60548 495 aaPredicted RBP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 PEX11BO96011 259 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 POLBP06746 335 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 CHRM2P08172 466 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 IL6RP08887 468 aaPredicted RBP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 TMEM225BP0DP42 221 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 DPEP1P16444 411 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 ZNF20P17024 532 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 DRD1P21728 446 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 MAGEA10P43363 369 aaPredicted RBP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 AARSP49588 968 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 PAPOLAP51003 745 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms