RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 TMA16Q96EY4 203 aaKnown RBP8.77□□□□□ -1.01
MSL3-201ENST00000312196 MRGPRX1Q96LB2 322 aa8.77□□□□□ -1.01
MSL3-201ENST00000312196 NUP58Q9BVL2 599 aa8.77□□□□□ -1.01
MSL3-201ENST00000312196 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
MSL3-201ENST00000312196 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
MSL3-201ENST00000312196 NUP205Q92621 2012 aa8.77□□□□□ -1.01
MSL3-201ENST00000312196 ARHGAP33O14559 1287 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 MDM4O15151 490 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 ENGP17813 658 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 PXNP49023 591 aaPredicted RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 MAN2A1Q16706 1144 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 TRIM61Q5EBN2 209 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 EFHC1Q5JVL4 640 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 DENND1CQ8IV53 801 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 SFTPA1Q8IWL2 248 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 PPM1KQ8N3J5 372 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 NAT16Q8N8M0 369 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 PIGKQ92643 395 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 MIS12Q9H081 205 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 SGK2Q9HBY8 427 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 APEX2Q9UBZ4 518 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 CEP192Q8TEP8 1941 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 METTL12A8MUP2 240 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 M0QYV0 167 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 TAF4O00268 1085 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 TULP2O00295 520 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 DFNA5O60443 496 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 FYNP06241 537 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 ATP5BP06576 529 aaKnown RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 PABPC1P11940 636 aaKnown RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 GNSP15586 552 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 COPAP53621 1224 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 ZNF234Q14588 700 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 GEN1Q17RS7 908 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 TOGARAM2Q6ZUX3 1019 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 MIB1Q86YT6 1006 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 CHPFQ8IZ52 775 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 UBA3Q8TBC4 463 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 HMGB4Q8WW32 186 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 PGAP3Q96FM1 320 aaPredicted RBP8.76□□□□□ -1.01
MSL3-201ENST00000312196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.76□□□□□ -1.01
MSL3-201ENST00000312196 ADAMTS1Q9UHI8 967 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 GGA2Q9UJY4 613 aa8.76□□□□□ -1.01
MSL3-201ENST00000312196 A0A1B0GTW7 788 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TYW5A2RUC4 315 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 DCLK1O15075 740 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 SYNCRIPO60506 623 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 DLDP09622 509 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 GABRB2P47870 512 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 SULT2A1Q06520 285 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 MS4A13Q5J8X5 152 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 DPY19L2P1Q6NXN4 242 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TRIM65Q6PJ69 517 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TPGS1Q6ZTW0 290 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 CHST9Q7L1S5 443 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 ADIPOR2Q86V24 386 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 IRF2BP1Q8IU81 584 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 ATP6V0D2Q8N8Y2 350 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 DDI1Q8WTU0 396 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 ZNF606Q8WXB4 792 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 PRCCQ92733 491 aaPredicted RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 P2RY11Q96G91 374 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 BTN2A3PQ96KV6 586 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 NOX5Q96PH1 765 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 CDC6Q99741 560 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TPSD1Q9BZJ3 242 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 POLR3BQ9NW08 1133 aaPredicted RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 SLC12A6Q9UHW9 1150 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 APOBEC2Q9Y235 224 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 TRIOO75962 3097 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 THADAQ6YHU6 1953 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 SRRM3A6NNA2 597 aaPredicted RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 KCNU1A8MYU2 1149 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 ALOX15BO15296 676 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 NDUFS2O75306 463 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 DAB1O75553 588 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 CD59P13987 128 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 IL12RB1P42701 662 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 ZNF33AQ06730 810 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 FUT11Q495W5 492 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TCEAL6Q6IPX3 200 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 KIAA1211LQ6NV74 962 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 DENND1BQ6P3S1 775 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 LRSAM1Q6UWE0 723 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 RBM43Q6ZSC3 357 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 ZSCAN30Q86W11 494 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 TCEAL3Q969E4 200 aa8.75□□□□□ -1.01
MSL3-201ENST00000312196 PRMT1Q99873 361 aaKnown RBP8.75□□□□□ -1.01
MSL3-201ENST00000312196 RSPH9Q9H1X1 276 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms