RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 TEX264Q9Y6I9 313 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 E7ESA3 106 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PRPSAP2O60256 369 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SNAI1O95863 264 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 GRIA1P42261 906 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 CDK7P50613 346 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 CRADDP78560 199 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 MSLNQ13421 630 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 TRIP10Q15642 601 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 KYAT1Q16773 422 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 ATG14Q6ZNE5 492 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 CRLF3Q8IUI8 442 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 MOCOSQ96EN8 888 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 GCNAQ96QF7 691 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 DMAP1Q9NPF5 467 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 KCNK4Q9NYG8 393 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 AK5Q9Y6K8 562 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 ENDOD1O94919 500 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 EPHX2P34913 555 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SCNN1BP51168 640 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 INHBCP55103 352 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 CCNA1P78396 465 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 HIC1Q14526 733 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 CCDC14Q49A88 953 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SLC26A11Q86WA9 606 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SCUBE3Q8IX30 993 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PGLYRP2Q96PD5 576 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 DDX43Q9NXZ2 648 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 KCNN4O15554 427 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 RFPL1O75677 317 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 CRABP2P29373 138 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 ROR1Q01973 937 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 TRMT5Q32P41 509 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 GRAMD1BQ3KR37 738 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 DRAXINQ8NBI3 349 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 GDPD5Q8WTR4 605 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 NR1H4Q96RI1 486 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 WWP1Q9H0M0 922 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 PLAC1Q9HBJ0 212 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 GBA2Q9HCG7 927 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 NGRNQ9NPE2 291 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 MAN1C1Q9NR34 630 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 HES2Q9Y543 173 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 PDHXO00330 501 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 NCF2P19878 526 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 DEUP1Q05D60 604 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 NOMO1Q15155 1222 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 TTC39BQ5VTQ0 682 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 TTC30AQ86WT1 665 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 PHF12Q96QT6 1004 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 LPIN3Q9BQK8 851 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 S100A14Q9HCY8 104 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 DDX18Q9NVP1 670 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 DNAJC16Q9Y2G8 782 aa18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 HBS1LQ9Y450 684 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-201ENST00000298564 COL1A2P08123 1366 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 SMPD1P17405 629 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 GRM5P41594 1212 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 MED21Q13503 144 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 GK3PQ14409 553 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 KRT81Q14533 505 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 MMEL1Q495T6 779 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 MARK2Q7KZI7 788 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 AZIN2Q96A70 460 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 EMID1Q96A84 441 aaPredicted RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 FAM49AQ9H0Q0 323 aaPredicted RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 PREBQ9HCU5 417 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 TTLL3Q9Y4R7 772 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 RBM47A0AV96 593 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 SNRPAP09012 282 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 CPOXP36551 454 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 YWHAZP63104 245 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 GLRA4Q5JXX5 417 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 FBXL19Q6PCT2 694 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 APLFQ8IW19 511 aaPredicted RBP18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 ZNF778Q96MU6 729 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 ZNF408Q9H9D4 720 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 PPCSQ9HAB8 311 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 PNPOQ9NVS9 261 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 LMCD1Q9NZU5 365 aa18.34■□□□□ 0.53
TSPAN17-201ENST00000298564 HMX2A2RU54 273 aa18.33■□□□□ 0.53
TSPAN17-201ENST00000298564 CAPN8A6NHC0 703 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms