RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 IRGQQ8WZA9 623 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 ZNF317Q96PQ6 595 aaPredicted RBP10.73□□□□□ -0.69
LIG1-220ENST00000601091 CNPY3Q9BT09 278 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 GPR88Q9GZN0 384 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 MYLK2Q9H1R3 596 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 VPS11Q9H270 941 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 ZNF408Q9H9D4 720 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 NEK6Q9HC98 313 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 HMGXB4Q9UGU5 601 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 NFASCO94856 1347 aa10.73□□□□□ -0.69
LIG1-220ENST00000601091 FYNP06241 537 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 UNGP13051 313 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MMP8P22894 467 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 PTPN4P29074 926 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 TYK2P29597 1187 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 PRPSAP1Q14558 356 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ZNF268Q14587 947 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 POMZP3Q6PJE2 187 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 TRABD2AQ86V40 505 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 DNAJC9Q8WXX5 260 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 FIZ1Q96SL8 496 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 MMP19Q99542 508 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 CYP39A1Q9NYL5 469 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ARHGAP28Q9P2N2 729 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 SAE1Q9UBE0 346 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MARCOQ9UEW3 520 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MAGED2Q9UNF1 606 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 TDRKHQ9Y2W6 561 aaKnown RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MROH7Q68CQ1 1323 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 TMEM191CA6NGB0 347 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 ALOX15BO15296 676 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ZNF862O60290 1169 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 C4BPAP04003 597 aaKnown RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 ENO2P09104 434 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 ADARP55265 1226 aaKnown RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 NCALDP61601 193 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 PLOD1Q02809 727 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 GSTM4Q03013 218 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 MON1BQ7L1V2 547 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 CLVS1Q8IUQ0 354 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 DDI1Q8WTU0 396 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 SLCO2A1Q92959 643 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 DCLRE1BQ9H816 532 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 KLHL8Q9P2G9 620 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MID2Q9UJV3 735 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 SLC8A2Q9UPR5 921 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 MAGEB2O15479 319 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ITGAVP06756 1048 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 LRPAP1P30533 357 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 GSTT1P30711 240 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 ELK3P41970 407 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 SESN2P58004 480 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 DGKZQ13574 1117 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 PDK4Q16654 411 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 FAXCQ5TGI0 409 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 RNF220Q5VTB9 566 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 METTL7BQ6UX53 244 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 ARID3BQ8IVW6 561 aaPredicted RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 HERVK_113Q902F9 699 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 TMEM176AQ96HP8 235 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 DDX18Q9NVP1 670 aaKnown RBP10.72□□□□□ -0.69
LIG1-220ENST00000601091 SPEF1Q9Y4P9 236 aa10.72□□□□□ -0.69
LIG1-220ENST00000601091 F5H423 210 aaPredicted RBP10.71□□□□□ -0.69
LIG1-220ENST00000601091 ZBTB7AO95365 584 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 HSPA4LO95757 839 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ADRA1DP25100 572 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 RAP1GAPP47736 663 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 NR2C2P49116 596 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 COPAP53621 1224 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 CNTN2Q02246 1040 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 GEN1Q17RS7 908 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ZNF600Q6ZNG1 722 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 MAGEC3Q8TD91 643 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 SMYD3Q9H7B4 428 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ERAP1Q9NZ08 941 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 GGA3Q9NZ52 723 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 BFARQ9NZS9 450 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 MYH1P12882 1939 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 A0A1B0GUL6 1792 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ADGRA3Q8IWK6 1321 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 A0A0B4J269 797 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ZSCAN5BA6NJL1 495 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 SIGLEC16A6NMB1 481 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 SPATA31C2B4DYI2 1134 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 ASS1P00966 412 aaKnown RBP10.71□□□□□ -0.69
LIG1-220ENST00000601091 ZNF3P17036 446 aa10.71□□□□□ -0.69
LIG1-220ENST00000601091 KDELR1P24390 212 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms