RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TRMT11Q7Z4G4 463 aaKnown RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 UNC45BQ8IWX7 931 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 DDX1Q92499 740 aaKnown RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 AZIN2Q96A70 460 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 ZC3H10Q96K80 434 aaKnown RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 SERPINB11Q96P15 392 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 TLR6Q9Y2C9 796 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 MUC22E2RYF6 1773 aaPredicted RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 TNRC6BQ9UPQ9 1833 aaKnown RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 CKAP5Q14008 2032 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 A0A1W2PQF6 199 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 F8VZ95 297 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 EPHB6O15197 1021 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 ACSL4O60488 711 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 ERBB2P04626 1255 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 ZNF445P59923 1031 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 EIF4EBP2Q13542 120 aaPredicted RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 PLK5Q496M5 336 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 FAM183BPQ6ZVS7 135 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 APTXQ7Z2E3 356 aaKnown RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 OLIG1Q8TAK6 271 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 GABRG3Q99928 467 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 SLC2A11Q9BYW1 496 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 DUSP15Q9H1R2 295 aaPredicted RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 POLMQ9NP87 494 aaPredicted RBP23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 INVSQ9Y283 1065 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 SIK3Q9Y2K2 1263 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 FRYLO94915 3013 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 SDK1Q7Z5N4 2213 aa23.22■■□□□ 1.31
GTF2F1-204ENST00000594965 TCRBV21S2A2A0A5A6 115 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 LRRC10BA6NIK2 292 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 CAPN9O14815 690 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 HOXB2P14652 356 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 CDH5P33151 784 aaPredicted RBP23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 SPEM2Q0P670 501 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 PIK3R6Q5UE93 754 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 TMEM215Q68D42 235 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 RNF43Q68DV7 783 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 RFWD3Q6PCD5 774 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 OLFML1Q6UWY5 402 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 NOP9Q86U38 636 aaKnown RBP23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 TMA16Q96EY4 203 aaKnown RBP23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 MYEOVQ96EZ4 313 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 SLC2A13Q96QE2 648 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 TRIM62Q9BVG3 475 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 ASNSD1Q9NWL6 643 aa23.21■■□□□ 1.31
GTF2F1-204ENST00000594965 WASH3PC4AMC7 463 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 IRAK2O43187 625 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 ALDH1A2O94788 518 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 TRUB2O95900 331 aaKnown RBP23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 GLI1P08151 1106 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 HLA-FP30511 346 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 JAM2P57087 298 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 ANO6Q4KMQ2 910 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 KIAA1211LQ6NV74 962 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 ANKS1BQ7Z6G8 1248 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 CHPFQ8IZ52 775 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 DEFB106AQ8N104 65 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 HMGB4Q8WW32 186 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 NOX5Q96PH1 765 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 CACNA2D2Q9NY47 1150 aa23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 XPO7Q9UIA9 1087 aaKnown RBP23.2■■□□□ 1.3
GTF2F1-204ENST00000594965 GRAP2O75791 330 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 TPM2P07951 284 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 GABRG2P18507 467 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 BCKDHBP21953 392 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 SLC11A2P49281 568 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 POLR2FP61218 127 aaKnown RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 USP39Q53GS9 565 aaKnown RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 DCAF6Q58WW2 860 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 EFHC1Q5JVL4 640 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 FKBP15Q5T1M5 1219 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 TAF3Q5VWG9 929 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 OR6B2Q6IFH4 312 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 CAVIN1Q6NZI2 390 aaKnown RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 AOPEPQ8N6M6 819 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 GPR161Q8N6U8 529 aaKnown RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 WFDC5Q8TCV5 224 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 LOXL4Q96JB6 756 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 PRICKLE1Q96MT3 831 aaPredicted RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 IRX2Q9BZI1 471 aaPredicted RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 FAM207AQ9NSI2 230 aaPredicted RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 THAP10Q9P2Z0 257 aaPredicted RBP23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 RAD54BQ9Y620 910 aa23.19■■□□□ 1.3
GTF2F1-204ENST00000594965 LGALS16A8MUM7 142 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 LRP3O75074 770 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 EPN2O95208 641 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 ATP1A3P13637 1013 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 SLC6A3Q01959 620 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 ENPP2Q13822 863 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 SYCP1Q15431 976 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 ZC3H12AQ5D1E8 599 aaKnown RBP23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 KIAA0907Q7Z7F0 614 aaPredicted RBP23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 FRMD1Q8N878 549 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 TMEM35BQ8NCS4 154 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 EPS8L1Q8TE68 723 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 IPO4Q8TEX9 1081 aaKnown RBP23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 RLN3Q8WXF3 142 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 ERLEC1Q96DZ1 483 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms