RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 PJA1Q8NG27 643 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 RNF34Q969K3 372 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 ZNF653Q96CK0 615 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 MYO1AQ9UBC5 1043 aa13.12□□□□□ -0.31
RETREG3-203ENST00000585894 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 MAN2B1O00754 1011 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 ACSL4O60488 711 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 GZMAP12544 262 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 PDGFRAP16234 1089 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 GALK1P51570 392 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 GSCP56915 257 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 OGDHQ02218 1023 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 NR1H3Q13133 447 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 FAM133BQ5BKY9 247 aaKnown RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 VPS36Q86VN1 386 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 NT5C3BQ969T7 300 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 ISCUQ9H1K1 167 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 CNOT8Q9UFF9 292 aaKnown RBP13.11□□□□□ -0.31
RETREG3-203ENST00000585894 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 SIT1Q9Y3P8 196 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 SNX10Q9Y5X0 201 aa13.11□□□□□ -0.31
RETREG3-203ENST00000585894 C2CD4BA6NLJ0 364 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 EGFP01133 1207 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 APOEP02649 317 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 TYRP14679 529 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 AOC1P19801 751 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 GAD2Q05329 585 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 NNTQ13423 1086 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 FZD5Q13467 585 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 CCDC122Q5T0U0 273 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ADGRF1Q5T601 910 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 RAP1GAP2Q684P5 730 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ALKBH5Q6P6C2 394 aaKnown RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 SUGP1Q8IWZ8 645 aaKnown RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 FAM217AQ8IXS0 508 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 NENFQ9UMX5 172 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 TULP3O75386 442 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 GPD1P21695 349 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 SDC4P31431 198 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 CCR1P32246 355 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 GBP1P32455 592 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 SLC11A2P49281 568 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 PIK3R6Q5UE93 754 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 PLEKHA7Q6IQ23 1121 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 Q6ZS52 159 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 FAM131BQ86XD5 332 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 CPXM2Q8N436 756 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 CD101Q93033 1021 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 ARHGEF26Q96DR7 871 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 NHEJ1Q9H9Q4 299 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-203ENST00000585894 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
RETREG3-203ENST00000585894 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 KCNU1A8MYU2 1149 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 GFRA2O00451 464 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 CCP110O43303 1012 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 AKR1B10O60218 316 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 CHRNB1P11230 501 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 AVPR2P30518 371 aa13.09□□□□□ -0.31
RETREG3-203ENST00000585894 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
RETREG3-203ENST00000585894 CHKAP35790 457 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms