RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ALOX15BO15296 676 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 PRPSAP2O60256 369 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 INHBAP08476 426 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 KRT16P08779 473 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 HOXC6P09630 235 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 PDGFRAP16234 1089 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 EPB42P16452 691 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 KDELR1P24390 212 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 ADRA1DP25100 572 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 ZNF132P52740 706 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 ENPEPQ07075 957 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 TARBP2Q15633 366 aaKnown RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 PPP6R3Q5H9R7 873 aaPredicted RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 RNASEH2BQ5TBB1 312 aaKnown RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 FYB2Q5VWT5 728 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 KIRREL3Q8IZU9 778 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 FAF2Q96CS3 445 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 CPB2Q96IY4 423 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 TMEM237Q96Q45 408 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 MYCBPQ99417 103 aaPredicted RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 PAFAH2Q99487 392 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 CDT1Q9H211 546 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.57□□□□□ -1.52
VAPA-203ENST00000577539 HMGXB4Q9UGU5 601 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 HAO1Q9UJM8 370 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 CPSF3Q9UKF6 684 aaKnown RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 SMG5Q9UPR3 1016 aaKnown RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 SHOC2Q9UQ13 582 aa5.57□□□□□ -1.52
VAPA-203ENST00000577539 DRG1Q9Y295 367 aaKnown RBP5.57□□□□□ -1.52
VAPA-203ENST00000577539 A0A087WZ62 844 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TCRBV7S3A2A0A539 114 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 SIGLEC16A6NMB1 481 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ACKR2O00590 384 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MGRN1O60291 552 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TCEA3O75764 348 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ERBB2P04626 1255 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ABHD2P08910 425 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 STAG3L1P0CL83 205 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TROVE2P10155 538 aaKnown RBP eCLIP5.56□□□□□ -1.52
VAPA-203ENST00000577539 BMP2P12643 396 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 NME2P22392 152 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 GEMIN4P57678 1058 aaKnown RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 OASLQ15646 514 aaKnown RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 SMAD1Q15797 465 aaKnown RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 C15orf59Q2T9L4 293 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 FNBP1LQ5T0N5 605 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TMEM63BQ5T3F8 832 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 C10orf62Q5T681 223 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 MOB2Q70IA6 237 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 PPM1NQ8N819 430 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 C7orf31Q8N865 590 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 AGAP11Q8TF27 550 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 NKD2Q969F2 451 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 GRAMD1AQ96CP6 724 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TWNKQ96RR1 684 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 NCAPGQ9BPX3 1015 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 LBHD1Q9BQE6 289 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 FDXACB1Q9BRP7 624 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 MIS12Q9H081 205 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MYLK2Q9H1R3 596 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MINDY3Q9H8M7 445 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 UBN1Q9NPG3 1134 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 CYTH4Q9UIA0 394 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 USP18Q9UMW8 372 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 CNTN6Q9UQ52 1028 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 PCDHB14Q9Y5E9 798 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 USH1CQ9Y6N9 552 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MYH9P35579 1960 aaKnown RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 TTC24A2A3L6 582 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 ADM5C9JUS6 153 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 GPR25O00155 361 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 VTNP04004 478 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ITGAVP06756 1048 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 P4HA1P13674 534 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ASPAP45381 313 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ROR1Q01973 937 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 BNIP1Q12981 228 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ACCSLQ4AC99 568 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 PREPLQ4J6C6 727 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 JADE1Q6IE81 842 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 C14orf80Q86SX3 495 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 KIAA0319LQ8IZA0 1049 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 RXFP2Q8WXD0 754 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 CPT1BQ92523 772 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 HPDLQ96IR7 371 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 EXOC2Q96KP1 924 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ASCC2Q9H1I8 757 aaPredicted RBP5.56□□□□□ -1.52
VAPA-203ENST00000577539 PDGFCQ9NRA1 345 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 TXLNGQ9NUQ3 528 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 FAM49BQ9NUQ9 324 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ASNSD1Q9NWL6 643 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 ACTR10Q9NZ32 417 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 SENP1Q9P0U3 644 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 MAD1L1Q9Y6D9 718 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 FIGNL2A6NMB9 653 aa5.56□□□□□ -1.52
VAPA-203ENST00000577539 EIF4E1BA6NMX2 242 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms