RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ANKRD11Q6UB99 2663 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 UPK3BL1B0FP48 263 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 UPK3BL2E5RIL1 263 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CETN3O15182 167 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 OPHN1O60890 802 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CD6P30203 668 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 HLA-FP30511 346 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CHKAP35790 457 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 GRIK2Q13002 908 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CUL2Q13617 745 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 TRIP4Q15650 581 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 DCAF17Q5H9S7 520 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 BSPRYQ5W0U4 402 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 ISM2Q6H9L7 571 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 RSRC2Q7L4I2 434 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 FAM124AQ86V42 546 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 HDDC3Q8N4P3 179 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 ZCCHC9Q8N567 271 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 PNPLA1Q8N8W4 532 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CLEC4CQ8WTT0 213 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CYB5D2Q8WUJ1 264 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 DNASE2BQ8WZ79 361 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 MYEOVQ96EZ4 313 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 CIPCQ9C0C6 399 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 MTG2Q9H4K7 406 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC32A1Q9H598 525 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 DNAAF2Q9NVR5 837 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
PRPF40B-212ENST00000551111 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 TAF4O00268 1085 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 O00370 1275 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 XPO1O14980 1071 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 ZBTB24O43167 697 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 CAPNS1P04632 268 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 NCAM1P13591 858 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 LCP1P13796 627 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 RGS7P49802 495 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 DCAF12L1Q5VU92 463 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 ANKS1BQ7Z6G8 1248 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 METTL3Q86U44 580 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 ENGASEQ8NFI3 743 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 C1orf216Q8TAB5 229 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC35C1Q96A29 364 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
PRPF40B-212ENST00000551111 ACACAQ13085 2346 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 KNTC1P50748 2209 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 MYLKQ15746 1914 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 EPHX1P07099 455 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 CD19P15391 556 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC6A4P31645 630 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ACSL1P33121 698 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 DPP6P42658 865 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 BCAT1P54687 386 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 DAOAP59103 153 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 STARD3Q14849 445 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 PTPRNQ16849 979 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ZNF658Q5TYW1 1059 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 LAYNQ6UX15 382 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 SLCO6A1Q86UG4 719 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ADIPOR2Q86V24 386 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ARHGAP18Q8N392 663 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 PLD4Q96BZ4 506 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 CDK5RAP1Q96SZ6 601 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 C6orf106Q9H6K1 298 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ABCB8Q9NUT2 735 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 EIF2B4Q9UI10 523 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 MSRB2Q9Y3D2 182 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 NEUROG3Q9Y4Z2 214 aa12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 ARID1BQ8NFD5 2236 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 TDRD6O60522 2096 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-212ENST00000551111 APC2O95996 2303 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 MEI4A8MW99 385 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SYNCRIPO60506 623 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 CBFA2T3O75081 653 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 IGLV3-19P01714 112 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 CYBBP04839 570 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 FYNP06241 537 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SYPP08247 313 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 CD70P32970 193 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms