RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MDGA1Q8NFP4 955 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 OLIG1Q8TAK6 271 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 DDI1Q8WTU0 396 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 LOXL4Q96JB6 756 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 SLC2A13Q96QE2 648 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 GABRG3Q99928 467 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 BPIFA3Q9BQP9 254 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 POLMQ9NP87 494 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 GMEB2Q9UKD1 530 aa17.9■□□□□ 0.46
SFSWAP-205ENST00000537164 LGALS16A8MUM7 142 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 NPC1O15118 1278 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 ACSL4O60488 711 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 ALDH1A2O94788 518 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 SLC11A2P49281 568 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 JAM2P57087 298 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 ENPP2Q13822 863 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 FKBP15Q5T1M5 1219 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 EGFLAMQ63HQ2 1017 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 CEP68Q76N32 757 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 TAC4Q86UU9 113 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 PASD1Q8IV76 773 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 FAM160A2Q8N612 972 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 C1orf131Q8NDD1 294 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 ANKRD20A12PQ8NF67 263 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 TMA16Q96EY4 203 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 HINFPQ9BQA5 517 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 ZDHHC4Q9NPG8 344 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 CLEC4EQ9ULY5 219 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 CEP83Q9Y592 693 aa17.89■□□□□ 0.45
SFSWAP-205ENST00000537164 A0A1W2PQF6 199 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 CAPN9O14815 690 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 HSF2BPO75031 334 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 GABRB2P47870 512 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 EIF4HQ15056 248 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 E2F5Q15329 346 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 TAF5Q15542 800 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 LPAL2Q16609 132 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 GEN1Q17RS7 908 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 PTPN20Q4JDL3 420 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 PIK3R6Q5UE93 754 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 NADSYN1Q6IA69 706 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ANO7Q6IWH7 933 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 SLC26A9Q7LBE3 791 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ANKS1BQ7Z6G8 1248 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 KIAA0907Q7Z7F0 614 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 C11orf74Q86VG3 221 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ZDHHC17Q8IUH5 632 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ZNF397Q8NF99 534 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 EPS8L1Q8TE68 723 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ERGIC2Q96RQ1 377 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 ACOX2Q99424 681 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 NAT10Q9H0A0 1025 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 CKAP5Q14008 2032 aa17.88■□□□□ 0.45
SFSWAP-205ENST00000537164 SDK1Q7Z5N4 2213 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 CACNA1AO00555 2505 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 TRUB2O95900 331 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 ERBB2P04626 1255 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 SLC6A4P31645 630 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 SCNN1AP37088 669 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 KLK7P49862 253 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 SLC6A3Q01959 620 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 PLK5Q496M5 336 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 ANO6Q4KMQ2 910 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 USP39Q53GS9 565 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 FAM183BPQ6ZVS7 135 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 NOP9Q86U38 636 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 KBTBD6Q86V97 674 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 KIAA2013Q8IYS2 634 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 DDX50Q9BQ39 737 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 DUSP15Q9H1R2 295 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 THAP10Q9P2Z0 257 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 ABCA7Q8IZY2 2146 aa17.87■□□□□ 0.45
SFSWAP-205ENST00000537164 MUC22E2RYF6 1773 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 EPHB6O15197 1021 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 TIMM44O43615 452 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 TSPAN3O60637 253 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 HOXB2P14652 356 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 HLA-FP30511 346 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 P2RY2P41231 377 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 SGSHP51688 502 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 POLR2FP61218 127 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 PITX1P78337 314 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 SYCP1Q15431 976 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 KLHL40Q2TBA0 621 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 DCAF6Q58WW2 860 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 TMEM215Q68D42 235 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 SDE2Q6IQ49 451 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 CAVIN1Q6NZI2 390 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 CHPFQ8IZ52 775 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 DEFB106AQ8N104 65 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 AOPEPQ8N6M6 819 aa17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 ZNF557Q8N988 423 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-205ENST00000537164 ADAM32Q8TC27 787 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms