RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 KRT37O76014 449 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 STK10O94804 968 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 TROVE2P10155 538 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 TGM2P21980 687 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 P2RY11Q96G91 374 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 SRPK1Q96SB4 655 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 TSSK1BQ9BXA7 367 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 CRTAC1Q9NQ79 661 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 FBXO6Q9NRD1 293 aaPredicted RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 SMYD2Q9NRG4 433 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 ANK1P16157 1881 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 SRRM3A6NNA2 597 aaPredicted RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 ERVK-10P10266 1014 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 NCALDP61601 193 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 MRPS5P82675 430 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 PURAQ00577 322 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 PKDCCQ504Y2 493 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 NCBP2-AS2Q69YL0 99 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 TMEM209Q96SK2 561 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 DUSP16Q9BY84 665 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 DNAI2Q9GZS0 605 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 VPS11Q9H270 941 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 KRT16P08779 473 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 SETSIPP0DME0 302 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 EML3Q32P44 896 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ZNF670Q9BS34 389 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 TCEA3O75764 348 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 PNPLA4P41247 253 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 PPP1R36Q96LQ0 422 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 RILPQ96NA2 401 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ZFP69BQ9UJL9 534 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ARL5CA6NH57 179 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 AMHP03971 560 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 FLT3LGP49771 235 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 SESN3P58005 492 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ELF3P78545 371 aaPredicted RBP16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 NLRP9Q7RTR0 991 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 RSPH3Q86UC2 560 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 SLC26A11Q86WA9 606 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 OR52K1Q8NGK4 314 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 AZIN2Q96A70 460 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 TRMT13Q9NUP7 481 aaKnown RBP16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 TEX264Q9Y6I9 313 aa16.43■□□□□ 0.22
ATP2C1-224ENST00000533801 H3BRJ5 948 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 MSI1O43347 362 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 AKR1A1P14550 325 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 PDK4Q16654 411 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 STAMBPL1Q96FJ0 436 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 FERMT1Q9BQL6 677 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 SENP1Q9P0U3 644 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 ERCC2P18074 760 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 ACADSBP45954 432 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 CHI3L2Q15782 390 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 ADAM2Q99965 735 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 CHADO15335 359 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 TIGD5Q53EQ6 642 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 SPNS2Q8IVW8 549 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 GPATCH11Q8N954 259 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 SHCBP1LQ9BZQ2 653 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 EURLQ9NYK6 297 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 HEY2Q9UBP5 337 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 RPS6KL1Q9Y6S9 549 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
ATP2C1-224ENST00000533801 FAM237BA0A1B0GVD1 139 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 TYROBPO43914 113 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 APOEP02649 317 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 SNRPAP09012 282 aaKnown RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ICE2Q659A1 982 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ARID3BQ8IVW6 561 aaPredicted RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 TKTL2Q9H0I9 626 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 POPDC2Q9HBU9 364 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ABI2Q9NYB9 513 aaPredicted RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 SFMBT1Q9UHJ3 866 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 G3BP2Q9UN86 482 aaKnown RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 MBLAC1A4D2B0 266 aaPredicted RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 NDC80O14777 642 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 XPO1O14980 1071 aaKnown RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 MDM4O15151 490 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ZWINTO95229 277 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 KCNA4P22459 653 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 CDC42EP1Q00587 391 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ARHGAP17Q68EM7 881 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 NUDCD3Q8IVD9 361 aa16.41■□□□□ 0.22
ATP2C1-224ENST00000533801 ZNF669Q96BR6 464 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms