RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GNL2Q13823 731 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 ARL13BQ3SXY8 428 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 TTC31Q49AM3 519 aaPredicted RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 IGF2-ASQ6U949 168 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 XKR5Q6UX68 686 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 CLEC18BQ6UXF7 455 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 PAQR9Q6ZVX9 377 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 ZNF720Q7Z2F6 126 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 CCDC83Q8IWF9 413 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 CLEC18CQ8NCF0 446 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 FBXO18Q8NFZ0 1043 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 HVCN1Q96D96 273 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 ANKRD36BP1Q96IX9 119 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 DEPDC7Q96QD5 511 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 ERVMER34-1Q9H9K5 563 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 DMAP1Q9NPF5 467 aaPredicted RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 TLR8Q9NR97 1041 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 OSER1Q9NX31 292 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 GOLGA8IPA6NC78 632 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 FAM47DPA6NHR8 397 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 GOLGA8JA6NMD2 632 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 ENO4A6NNW6 628 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 C10orf142B7Z368 130 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 TRIM38O00635 465 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 MDM4O15151 490 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 TIMM44O43615 452 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 SIGLEC6O43699 453 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 OPA1O60313 960 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 CSO75390 466 aaKnown RBP14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 STC2O76061 302 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 KLKB1P03952 638 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 ASIC1P78348 528 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 TLE1Q04724 770 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 KCNJ12Q14500 433 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 FAM35AQ86V20 835 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 OXR1Q8N573 874 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 STRA6Q9BX79 667 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 PRSS16Q9NQE7 514 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 HSPBP1Q9NZL4 362 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 SEPT3Q9UH03 358 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 PAXBP1Q9Y5B6 917 aa14.58□□□□□ -0.08
NKX3-1-202ENST00000523261 TLR4O00206 839 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 DDIT3P35638 169 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 PLA2G4AP47712 749 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 GALCP54803 685 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 ARID5AQ03989 594 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 ZNF211Q13398 564 aaPredicted RBP14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 NCEH1Q6PIU2 408 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 ZMIZ2Q8NF64 920 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 CCDC97Q96F63 343 aaPredicted RBP14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 PSMG3-AS1Q96PY0 264 aa14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 GZF1Q9H116 711 aaPredicted RBP14.57□□□□□ -0.08
NKX3-1-202ENST00000523261 A0A1W2PNU3 283 aaPredicted RBP14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 A8MXQ7 604 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 EFSO43281 561 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 TNNC2P02585 160 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 GARTP22102 1010 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 CHKAP35790 457 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 CLN3Q13286 438 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 MCM6Q14566 821 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 FNDC3BQ53EP0 1204 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 KLHDC10Q6PID8 442 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 USP30Q70CQ3 517 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 DYMQ7RTS9 669 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 SPATS2Q86XZ4 545 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 CYB5D2Q8WUJ1 264 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 SMARCD1Q96GM5 515 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 SLC46A1Q96NT5 459 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 SLC2A11Q9BYW1 496 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 FBXO44Q9H4M3 255 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 SERGEFQ9UGK8 458 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 NUDT5Q9UKK9 219 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 MAN2B2Q9Y2E5 1009 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 ATP8B3O60423 1300 aa14.56□□□□□ -0.08
NKX3-1-202ENST00000523261 VWA3AA6NCI4 1184 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 SDC3O75056 442 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 DAB2P98082 770 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 DUOXA2Q1HG44 320 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 ZSCAN23Q3MJ62 389 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 SGO2Q562F6 1265 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 ZNF776Q68DI1 518 aaPredicted RBP14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 NOC3LQ8WTT2 800 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 GOLGA1Q92805 767 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 EXTL1Q92935 676 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 CCNL2Q96S94 520 aaPredicted RBP14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 SMOQ99835 787 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 SEMA3CQ99985 751 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 CBWD1Q9BRT8 395 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 MED10Q9BTT4 135 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 PABPC3Q9H361 631 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 KRT82Q9NSB4 513 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 EXOC7Q9UPT5 735 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms