RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MSANTD2Q6P1R3 559 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 ACSM6Q6P461 480 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 FBXO38Q6PIJ6 1188 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 OR52L2PQ8NGH6 319 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 VCPIP1Q96JH7 1222 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 EIF3CQ99613 913 aaKnown RBP3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 WACQ9BTA9 647 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 RNF26Q9BY78 433 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 CERS4Q9HA82 394 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 MOV10Q9HCE1 1003 aaKnown RBP3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 ZBTB40Q9NUA8 1239 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 TMEM45AQ9NWC5 275 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 PCDHB7Q9Y5E2 793 aa3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 TTBK1Q5TCY1 1321 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P29-201ENST00000505659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 A0A1W2PPC1 479 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 M0QYT0 321 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 NPC1O15118 1278 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 KAT7O95251 611 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 SLC3A2P08195 630 aaKnown RBP3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 ITGA5P08648 1049 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 NBPF7P0C2Y1 421 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 PSG1P11464 419 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 ITGB6P18564 788 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 MATN1P21941 496 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 LEXMQ3ZCV2 418 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 IZUMO3Q5VZ72 239 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 TLDC1Q6P9B6 456 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 KRT27Q7Z3Y8 459 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 DPP9Q86TI2 863 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 RHPN2Q8IUC4 686 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 SLC22A17Q8WUG5 538 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 BRI3BPQ8WY22 251 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 NPIPB3Q92617 1050 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 GJA10Q969M2 543 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 P2RY11Q96G91 374 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 CCDC138Q96M89 665 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 GPR78Q96P69 363 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 SENP7Q9BQF6 1050 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 ARNT2Q9HBZ2 717 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 IGSF9Q9P2J2 1179 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 DTNAQ9Y4J8 743 aa3.93□□□□□ -1.78
HMGB1P29-201ENST00000505659 UGDHO60701 494 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 TMEM191BP0C7N4 346 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 ABCB4P21439 1286 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 MMP8P22894 467 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 SLC8A1P32418 973 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 POLGP54098 1239 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 DMWDQ09019 674 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 GRM4Q14833 912 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 PGM5Q15124 567 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 RAB30Q15771 203 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 DHRS13Q6UX07 377 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 FAM57BQ71RH2 274 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 UBE2Q1Q7Z7E8 422 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 RASGRP3Q8IV61 690 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 LAS2Q8IYD9 372 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 ARFGAP1Q8N6T3 406 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 ASB12Q8WXK4 309 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 OVCA2Q8WZ82 227 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 ZNF845Q96IR2 970 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 ZFYVE19Q96K21 471 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 TTLL2Q9BWV7 592 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 RXFP3Q9NSD7 469 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 MSRB1Q9NZV6 116 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 COG5Q9UP83 839 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 B3GNT3Q9Y2A9 372 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 CEP83Q9Y592 693 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 HS3ST3B1Q9Y662 390 aa3.92□□□□□ -1.78
HMGB1P29-201ENST00000505659 A0A0G2JK05 382 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 PNMA6EA0A0J9YXQ4 647 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 TTC34A8MYJ7 566 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 H3BNX3 289 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 TRIM38O00635 465 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 PIP5K1BO14986 540 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 CER1O95813 267 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 CD63P08962 238 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 FGF2P09038 288 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 RFPL3SP0C7P2 107 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 KLRK1P26718 216 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 ME1P48163 572 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 TBX4P57082 545 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 COLCA1Q6ZS62 124 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 SRLQ86TD4 932 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 ADGRF4Q8IZF3 695 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 ARL14EPQ8N8R7 260 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 EME1Q96AY2 570 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 MSI2Q96DH6 328 aaKnown RBP3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 CAMK1GQ96NX5 476 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 NUDT22Q9BRQ3 303 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 TRMOQ9BU70 441 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 EIF2AQ9BY44 585 aaKnown RBP3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 AAMDCQ9H7C9 122 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 FBXO28Q9NVF7 368 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 SLC39A10Q9ULF5 831 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 SQORQ9Y6N5 450 aa3.91□□□□□ -1.78
HMGB1P29-201ENST00000505659 TRBV5-3A0A0A0MS03 114 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms