RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 N4BP2L1Q5TBK1 243 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 B3GNT9Q6UX72 402 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SCARA5Q6ZMJ2 495 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 BHLHE22Q8NFJ8 381 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 OR5B17Q8NGF7 314 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 FAM110BQ8TC76 370 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TRIM11Q96F44 468 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ATXN7L3BQ96GX2 97 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ABHD8Q96I13 439 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 OR52B2Q96RD2 323 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 CDRT15Q96T59 188 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ZNF696Q9H7X3 374 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 COL20A1Q9P218 1284 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ABT1Q9ULW3 272 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 GINS2Q9Y248 185 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 COX4I1P13073 169 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 CD247P20963 164 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 HOXD12P35452 270 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ETFBP38117 255 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 HALP42357 657 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ABCG1P45844 678 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 GJA8P48165 433 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 GMPSP49915 693 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 CUL2Q13617 745 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TNFAIP1Q13829 316 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 FLOT2Q14254 428 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TGFBIQ15582 683 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 DCAF6Q58WW2 860 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 APOBEC3HQ6NTF7 200 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 Q6ZNX1 250 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PHF13Q86YI8 300 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TSPAN14Q8NG11 270 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ACER1Q8TDN7 264 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 WRNIP1Q96S55 665 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TMEM39BQ9GZU3 492 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 POPDC2Q9HBU9 364 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 THAP1Q9NVV9 213 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 ARHGAP10A1A4S6 786 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 J3QRK9 145 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SERPINB7O75635 380 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 RNASEH2AO75792 299 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 FUCA1P04066 466 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ZNF24P17028 368 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PSMA2P25787 234 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 NR1H2P55055 460 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 TMEM198Q66K66 360 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 DARS2Q6PI48 645 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 UNC5AQ6ZN44 842 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PCGF5Q86SE9 256 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 AHI1Q8N157 1196 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 WDTC1Q8N5D0 677 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 JADE3Q92613 823 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 FBXL8Q96CD0 374 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 MFSD14AQ96MC6 490 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PPP1R10Q96QC0 940 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 SCINQ9Y6U3 715 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ASTN2O75129 1339 aaPredicted RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 WDR64B1ANS9 1081 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ENO3P13929 434 aaPredicted RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 ARSAP15289 507 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PHEXP78562 749 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 RELAQ04206 551 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 CEACAM7Q14002 265 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SLC9A4Q6AI14 798 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 TMEM53Q6P2H8 277 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 EEPD1Q7L9B9 569 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SNX32Q86XE0 403 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 IQCF2Q8IXL9 164 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 LZICQ8WZA0 190 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 TFAP2BQ92481 460 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PAIP1Q9H074 479 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 KMT5AQ9NQR1 393 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SLC38A7Q9NVC3 462 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 KCND2Q9NZV8 630 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PSAT1Q9Y617 370 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ABCA3Q99758 1704 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SH3PXD2BA1X283 911 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 FBP2O00757 339 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ZNF195O14628 629 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 ZC3H11AO75152 810 aaKnown RBP eCLIP8.18□□□□□ -1.1
TPM3-215ENST00000469717 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 PRAMEP78395 509 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 XIAPP98170 497 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 SLC25A11Q02978 314 aaKnown RBP8.18□□□□□ -1.1
TPM3-215ENST00000469717 KCNJ11Q14654 390 aa8.18□□□□□ -1.1
TPM3-215ENST00000469717 PCLAFQ15004 111 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms