RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 APOEP02649 317 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 FERP16591 822 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 HOXD9P28356 352 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SLC6A4P31645 630 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SCNN1AP37088 669 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SLC11A2P49281 568 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SGSHP51688 502 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 CENPCQ03188 943 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 DMC1Q14565 340 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 NR1I3Q14994 352 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 MPPE1Q53F39 396 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 C2orf27AQ580R0 203 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 ADGRF1Q5T601 910 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 OTUD1Q5VV17 481 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-206ENST00000465877 LRSAM1Q6UWE0 723 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SYT13Q7L8C5 426 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 ZBTB44Q8NCP5 570 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 DDI1Q8WTU0 396 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 PRICKLE1Q96MT3 831 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-206ENST00000465877 HHIPQ96QV1 700 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 TSPY26PQ9H489 355 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SEPT11Q9NVA2 429 aaKnown RBP13.41□□□□□ -0.26
COL5A1-206ENST00000465877 POLR3BQ9NW08 1133 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-206ENST00000465877 DDIT4Q9NX09 232 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 MMP17Q9ULZ9 603 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 SLC8A2Q9UPR5 921 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 CFAP54Q96N23 3096 aa13.41□□□□□ -0.26
COL5A1-206ENST00000465877 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 ZNF292O60281 2723 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 SYNJ2BP-COX16A0A087WUM0 186 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 A0A0A0MRY4 1105 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 TSPAN3O60637 253 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 HOXC13P31276 330 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 NOS2P35228 1153 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 TIE1P35590 1138 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 TNFRSF4P43489 277 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 SULT1E1P49888 294 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 MRPS21P82921 87 aaKnown RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 CDK17Q00537 523 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 DMWDQ09019 674 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 EIF4EBP2Q13542 120 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 MMS22LQ6ZRQ5 1243 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 IL17RCQ8NAC3 791 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 NKD2Q969F2 451 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 AZIN2Q96A70 460 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 C11orf70Q9BRQ4 267 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 METTL5Q9NRN9 209 aaKnown RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 COX16Q9P0S2 106 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
COL5A1-206ENST00000465877 TNRC6BQ9UPQ9 1833 aaKnown RBP13.4□□□□□ -0.26
COL5A1-206ENST00000465877 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 TYW5A2RUC4 315 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 TBC1D3BA6NDS4 549 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 PRRT4C9JH25 899 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 LILRB5O75023 590 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 KLF8O95600 359 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 MMP8P22894 467 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 FLT3P36888 993 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 PBX1P40424 430 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 MATKP42679 507 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 FNTBP49356 437 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 MRE11P49959 708 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 NRLP54845 237 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 UBASH3AP57075 661 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 ASIC2Q16515 512 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 HSF5Q4G112 596 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 FIGNQ5HY92 759 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 HEATR6Q6AI08 1181 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 RFWD3Q6PCD5 774 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 CCDC33Q8N5R6 958 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 TXNDC5Q8NBS9 432 aaKnown RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 BTN2A3PQ96KV6 586 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 RRN3Q9NYV6 651 aa13.39□□□□□ -0.27
COL5A1-206ENST00000465877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL5A1-206ENST00000465877 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms