RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ZNF572Q7Z3I7 529 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-208ENST00000430669 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 CNGB3Q9NQW8 809 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 PHTF1Q9UMS5 762 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 RAMP2O60895 175 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 AKT1P31749 480 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 NOMO3P69849 1222 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 PDPK2PQ6A1A2 396 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 TEKT4Q8WW24 435 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 CD274Q9NZQ7 290 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
PTCH1-208ENST00000430669 CDH8P55286 799 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 CORO7P57737 925 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 RASIP1Q5U651 963 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 SDE2Q6IQ49 451 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 USP33Q8TEY7 942 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 ANKRD27Q96NW4 1050 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 VTI1BQ9UEU0 232 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 LIASO43766 372 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 HK2P52789 917 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 AMPD2Q01433 879 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 PABPC1LQ4VXU2 614 aaKnown RBP11.86□□□□□ -0.51
PTCH1-208ENST00000430669 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 MARC1Q5VT66 337 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 APOPT1Q96IL0 206 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 DUSP16Q9BY84 665 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 VPS26AO75436 327 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 RPSAP08865 295 aaKnown RBP11.86□□□□□ -0.51
PTCH1-208ENST00000430669 MMP8P22894 467 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 SKOR1P84550 965 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 EFEMP1Q12805 493 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 MPP3Q13368 585 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 C2CD6Q53TS8 623 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 DCLRE1AQ6PJP8 1040 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 FAM183BPQ6ZVS7 135 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 ERP27Q96DN0 273 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 SYTL2Q9HCH5 934 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
PTCH1-208ENST00000430669 A0A0A0MRY4 1105 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ARF4P18085 180 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CALB2P22676 271 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 MFSD7Q6UXD7 560 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 UCMAQ8WVF2 138 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CCDC138Q96M89 665 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 SPATA13Q96N96 652 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 A0A087X1B8 175 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 EFCAB14O75071 495 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 SERPINF2P08697 491 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ATP4AP20648 1035 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 COPAP53621 1224 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 PARP6Q2NL67 630 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 OLFM3Q96PB7 478 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ASB2Q96Q27 587 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 GLP2RO95838 553 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 MLH1P40692 756 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 MATKP42679 507 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 SP3Q02447 781 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CUL3Q13618 768 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 MTFR1Q15390 333 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 SHROOM1Q2M3G4 852 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-208ENST00000430669 KDELC2Q7Z4H8 507 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 NCKIPSDQ9NZQ3 722 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 KIF17Q9P2E2 1029 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 HEATR9A2RTY3 570 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 RNF103O00237 685 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CCNE2O96020 404 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CNGA3Q16281 694 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 FAM171A1Q5VUB5 890 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 TISP43B9A030 160 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 POMCP01189 267 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 STX5Q13190 355 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
PTCH1-208ENST00000430669 NRDE2Q9H7Z3 1164 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 RNF112Q9ULX5 631 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 C2CD2LO14523 706 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 NUDT17P0C025 328 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-208ENST00000430669 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 NAALADL1Q9UQQ1 740 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 ADGRA3Q8IWK6 1321 aa11.85□□□□□ -0.51
PTCH1-208ENST00000430669 RHOCP08134 193 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 STRADAQ7RTN6 431 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ART4Q93070 314 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 FAM111AQ96PZ2 611 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms