RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 DNAJA2O60884 412 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 TMCC1O94876 653 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 CRTAMO95727 393 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 HMGCRP04035 888 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 IDH3AP50213 366 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 CDKL1Q00532 357 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 KCTD21Q4G0X4 260 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 FAM102AQ5T9C2 384 aaPredicted RBP13.9□□□□□ -0.18
LRCH3-203ENST00000425562 TEDDM1Q5T9Z0 273 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 MIS12Q9H081 205 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 GPAMQ9HCL2 828 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
LRCH3-203ENST00000425562 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 HMGXB4Q9UGU5 601 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 USP18Q9UMW8 372 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 CEP350Q5VT06 3117 aa13.9□□□□□ -0.18
LRCH3-203ENST00000425562 TPP1O14773 563 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 KRT38O76015 456 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ZBED1O96006 694 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 STT3AP46977 705 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TUBB3Q13509 450 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 LRRC71Q8N4P6 559 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ZNF302Q9NR11 478 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 THAP1Q9NVV9 213 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ERBB2P04626 1255 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 SLC5A2P31639 672 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TCF7P36402 384 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 RGS7P49802 495 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 MYBPC1Q00872 1141 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 KRT81Q14533 505 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 LRRC8BQ6P9F7 803 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 SNX31Q8N9S9 440 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 FAM210AQ96ND0 272 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 CDRT15Q96T59 188 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 DCUN1D5Q9BTE7 237 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 WDR27A2RRH5 827 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 APOC4-APOC2K7ER74 178 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 METTL18O95568 372 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 APOC2P02655 101 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TRPC3Q13507 836 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 HNRNPDQ14103 355 aaKnown RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 SLC9B1Q4ZJI4 515 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ANGEL2Q5VTE6 544 aaKnown RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TMEM198Q66K66 360 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
LRCH3-203ENST00000425562 LENG8Q96PV6 779 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
LRCH3-203ENST00000425562 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■■ 85.1
LRCH3-203ENST00000425562 COL11A1P12107 1806 aaPredicted RBP13.88□□□□□ -0.19
LRCH3-203ENST00000425562 TCRBV5S1A1TA0A578 114 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 APOEP02649 317 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 KRT7P08729 469 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 DESP17661 470 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 AOC1P19801 751 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 RGS2P41220 211 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 PSMD7P51665 324 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 CDH15P55291 814 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 BACE1P56817 501 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 KYAT3Q6YP21 454 aaKnown RBP13.88□□□□□ -0.19
LRCH3-203ENST00000425562 NCAPG2Q86XI2 1143 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 MAPK15Q8TD08 544 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 PLEKHG4BQ96PX9 1271 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 BTBD7Q9P203 1132 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 NFASCO94856 1347 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SNNO75324 88 aaPredicted RBP13.88□□□□□ -0.19
LRCH3-203ENST00000425562 C1QAP02745 245 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SUPT20HL2P0C7V6 817 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 FGF3P11487 239 aaPredicted RBP13.88□□□□□ -0.19
LRCH3-203ENST00000425562 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 LRRC38Q5VT99 294 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
LRCH3-203ENST00000425562 OR52B2Q96RD2 323 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms