RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PGAP2Q9UHJ9 254 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 RAD54BQ9Y620 910 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CFAP99D6REC4 459 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 UBDO15205 165 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ZSCAN9O15535 394 aaPredicted RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 LCA5LO95447 670 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 PSMG1O95456 288 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ZNF23P17027 643 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 PPP3CAQ08209 521 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 BST2Q10589 180 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 CSTF3Q12996 717 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 TTLL9Q3SXZ7 439 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 AARS2Q5JTZ9 985 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 HYIQ5T013 277 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 THEMIS2Q5TEJ8 643 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 IL31Q6EBC2 164 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ELMOD1Q8N336 334 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 STX19Q8N4C7 294 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ATP6V0D2Q8N8Y2 350 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 DNERQ8NFT8 737 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 LNX1Q8TBB1 728 aaPredicted RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 USP13Q92995 863 aaPredicted RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 TNFRSF25Q93038 417 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 MIEF2Q96C03 454 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 FOPNLQ96NB1 174 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 IARS2Q9NSE4 1012 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 ITGA11Q9UKX5 1188 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 EIF3LQ9Y262 564 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 MYO1GB0I1T2 1018 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 STX7O15400 261 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 SHOX2O60902 331 aaPredicted RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 WDR47O94967 919 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 HMGCRP04035 888 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 SHBGP04278 402 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CHRM3P20309 590 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 NPY2RP49146 381 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 RAD23AP54725 363 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 RIPK1Q13546 671 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 NFIL3Q16649 462 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 SPANXN3Q5MJ09 141 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 TAF2Q6P1X5 1199 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 FAM131BQ86XD5 332 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 NT5DC4Q86YG4 428 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CCDC33Q8N5R6 958 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 STKLD1Q8NE28 680 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 DLG3Q92796 817 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 OPTNQ96CV9 577 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 THUMPD3Q9BV44 507 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 TBC1D10AQ9BXI6 508 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 TRMT6Q9UJA5 497 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 TRHDEQ9UKU6 1024 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 VANGL2Q9ULK5 521 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
VPS36-201ENST00000378060 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 C5orf58C9J3I9 102 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 TULP2O00295 520 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 AP1G2O75843 785 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PGAM1P18669 254 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ACO1P21399 889 aaKnown RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 ZNF135P52742 658 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 GTF2BQ00403 316 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 DPYSL3Q14195 570 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PGM5Q15124 567 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 AGKQ53H12 422 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 METTL7BQ6UX53 244 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 EXOC3L1Q86VI1 746 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 HORMAD1Q86X24 394 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CHSY1Q86X52 802 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CCDC60Q8IWA6 550 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 GLIS3Q8NEA6 775 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PAWRQ96IZ0 340 aaKnown RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 CPNE1Q99829 537 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PRKD2Q9BZL6 878 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 MPP6Q9NZW5 540 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ASTN1O14525 1302 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 CHADO15335 359 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 VPS26AO75436 327 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 JCHAINP01591 159 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 TPBGLP0DKB5 382 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 FASP25445 335 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CASP5P51878 434 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CDH17Q12864 832 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 XRCC4Q13426 336 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ACCSLQ4AC99 568 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CACHD1Q5VU97 1274 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ERO1BQ86YB8 467 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 BBS7Q8IWZ6 715 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 RFWD2Q8NHY2 731 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PIWIL2Q8TC59 973 aaKnown RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 GDPD5Q8WTR4 605 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms