RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ARTNQ5T4W7 220 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 SNX30Q5VWJ9 437 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 KDM7AQ6ZMT4 941 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 OTUD6BQ8N6M0 293 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 KCTD6Q8NC69 237 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 KREMEN2Q8NCW0 462 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 PSMG2Q969U7 264 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 TRMT2BQ96GJ1 504 aaKnown RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 KCTD15Q96SI1 283 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 TRIM62Q9BVG3 475 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 EMILIN2Q9BXX0 1053 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 PLEKHA4Q9H4M7 779 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 CCSER2Q9H7U1 834 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 ZNF334Q9HCZ1 680 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 TLR8Q9NR97 1041 aaKnown RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 R3HDM2Q9Y2K5 976 aaKnown RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 DOCK6Q96HP0 2047 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 ZNF840PA6NDX5 716 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 NRG2O14511 850 aaPredicted RBP15.23■□□□□ 0.03
CXCL12-201ENST00000343575 NDUFAB1O14561 156 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 RARGP13631 454 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 KAZNQ674X7 775 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 ARHGAP18Q8N392 663 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
CXCL12-201ENST00000343575 MICAL1Q8TDZ2 1067 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 NTAN1Q96AB6 310 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 LRRC3Q9BY71 257 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
CXCL12-201ENST00000343575 IL21Q9HBE4 155 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 F9P00740 461 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 DESP17661 470 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 PSEN1P49768 467 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 MNAT1P51948 309 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 SCAPQ12770 1279 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 CYP1B1Q16678 543 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 HDAC7Q8WUI4 952 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 FAF2Q96CS3 445 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 SLC39A13Q96H72 371 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 NAP1L3Q99457 506 aaPredicted RBP15.23■□□□□ 0.03
CXCL12-201ENST00000343575 EFR3BQ9Y2G0 817 aa15.23■□□□□ 0.03
CXCL12-201ENST00000343575 PDE4DIPQ5VU43 2346 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 TRANK1O15050 2925 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 FAM72CH0Y354 149 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
CXCL12-201ENST00000343575 GLUD1P00367 558 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 F11P03951 625 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 C8AP07357 584 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 SEMA3BQ13214 749 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PLD1Q13393 1074 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PDK2Q15119 407 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 FAM72AQ5TYM5 149 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 FAM72DQ6L9T8 149 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 ADGRD2Q7Z7M1 963 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 FAM72BQ86X60 149 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PSTKQ8IV42 348 aaKnown RBP15.22■□□□□ 0.03
CXCL12-201ENST00000343575 KLHL7Q8IXQ5 586 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PQLC3Q8N755 202 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PCDH19Q8TAB3 1148 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 ATG4AQ8WYN0 398 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 OVCA2Q8WZ82 227 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 KRT12Q99456 494 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 LRRC1Q9BTT6 524 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 CALN1Q9BXU9 219 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 TKTL2Q9H0I9 626 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 EPN3Q9H201 632 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 PRO3102Q9H379 93 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 DHX35Q9H5Z1 703 aaKnown RBP15.22■□□□□ 0.03
CXCL12-201ENST00000343575 WDCPQ9H6R7 721 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 ARHGEF38Q9NXL2 777 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
CXCL12-201ENST00000343575 CCDC188H7C350 402 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 PER2O15055 1255 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 TLR5O60602 858 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 ZMYND10O75800 440 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 EPCAMP16422 314 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 EPHB3P54753 998 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 EFEMP1Q12805 493 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 CLUL1Q15846 466 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 PPP6R3Q5H9R7 873 aaPredicted RBP15.21■□□□□ 0.03
CXCL12-201ENST00000343575 PPP2R2DQ66LE6 453 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 BBS12Q6ZW61 710 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 VSIG1Q86XK7 387 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 TMC8Q8IU68 726 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 TDHQ8IZJ6 230 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 ARFGAP2Q8N6H7 521 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 RNF139Q8WU17 664 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 C1orf54Q8WWF1 131 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 RNF157Q96PX1 679 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 FAM118BQ9BPY3 351 aa15.21■□□□□ 0.03
CXCL12-201ENST00000343575 SAE1Q9UBE0 346 aaPredicted RBP15.21■□□□□ 0.03
CXCL12-201ENST00000343575 XPO7Q9UIA9 1087 aaKnown RBP15.21■□□□□ 0.03
CXCL12-201ENST00000343575 KCNU1A8MYU2 1149 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 HMGB1P1B2RPK0 211 aaPredicted RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 ANKRD65E5RJM6 399 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 RAB30Q15771 203 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms