RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
VPS36-207ENST00000611132 GLRA4Q5JXX5 417 aa15.04■□□□□ -0
VPS36-207ENST00000611132 GRTP1Q5TC63 336 aa15.04■□□□□ -0
VPS36-207ENST00000611132 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
VPS36-207ENST00000611132 UNC45BQ8IWX7 931 aa15.04■□□□□ -0
VPS36-207ENST00000611132 PQLC1Q8N2U9 271 aa15.04■□□□□ -0
VPS36-207ENST00000611132 TMCO5AQ8N6Q1 288 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
VPS36-207ENST00000611132 WDR41Q9HAD4 459 aa15.04■□□□□ -0
VPS36-207ENST00000611132 IARS2Q9NSE4 1012 aaKnown RBP15.04■□□□□ -0
VPS36-207ENST00000611132 TPP1O14773 563 aa15.04■□□□□ -0
VPS36-207ENST00000611132 MGAT1P26572 445 aa15.04■□□□□ -0
VPS36-207ENST00000611132 RTP1P59025 263 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ATP1A4Q13733 1029 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ANGEL2Q5VTE6 544 aaKnown RBP15.04■□□□□ -0
VPS36-207ENST00000611132 CHSY1Q86X52 802 aa15.04■□□□□ -0
VPS36-207ENST00000611132 SAMD3Q8N6K7 520 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ATG4CQ96DT6 458 aa15.04■□□□□ -0
VPS36-207ENST00000611132 PRMT6Q96LA8 375 aaPredicted RBP15.04■□□□□ -0
VPS36-207ENST00000611132 ZNF560Q96MR9 790 aa15.04■□□□□ -0
VPS36-207ENST00000611132 PRMT7Q9NVM4 692 aaPredicted RBP15.04■□□□□ -0
VPS36-207ENST00000611132 V9GYQ6 96 aa15.04■□□□□ -0
VPS36-207ENST00000611132 BPGMP07738 259 aa15.04■□□□□ -0
VPS36-207ENST00000611132 PGAM1P18669 254 aa15.04■□□□□ -0
VPS36-207ENST00000611132 AMPD1P23109 780 aa15.04■□□□□ -0
VPS36-207ENST00000611132 C21orf59P57076 290 aa15.04■□□□□ -0
VPS36-207ENST00000611132 GALNTL6Q49A17 601 aa15.04■□□□□ -0
VPS36-207ENST00000611132 NPNTQ6UXI9 565 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ACMSDQ8TDX5 336 aa15.04■□□□□ -0
VPS36-207ENST00000611132 MTFR1LQ9H019 292 aa15.04■□□□□ -0
VPS36-207ENST00000611132 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.04■□□□□ -0
VPS36-207ENST00000611132 GGA3Q9NZ52 723 aa15.04■□□□□ -0
VPS36-207ENST00000611132 KIF1AQ12756 1690 aa15.04■□□□□ -0
VPS36-207ENST00000611132 PEX1O43933 1283 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ZNF23P17027 643 aa15.04■□□□□ -0
VPS36-207ENST00000611132 SLC18A1P54219 525 aa15.04■□□□□ -0
VPS36-207ENST00000611132 TBCELQ5QJ74 424 aa15.04■□□□□ -0
VPS36-207ENST00000611132 TDRD10Q5VZ19 366 aaKnown RBP15.04■□□□□ -0
VPS36-207ENST00000611132 BRSK2Q8IWQ3 736 aa15.04■□□□□ -0
VPS36-207ENST00000611132 CPT1BQ92523 772 aa15.04■□□□□ -0
VPS36-207ENST00000611132 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.04■□□□□ -0
VPS36-207ENST00000611132 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
VPS36-207ENST00000611132 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
VPS36-207ENST00000611132 HBS1LQ9Y450 684 aaKnown RBP15.04■□□□□ -0
VPS36-207ENST00000611132 MYH6P13533 1939 aa15.03■□□□□ -0
VPS36-207ENST00000611132 CAPN8A6NHC0 703 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SPDYE16A6NNV3 312 aaPredicted RBP15.03■□□□□ -0
VPS36-207ENST00000611132 UBDO15205 165 aa15.03■□□□□ -0
VPS36-207ENST00000611132 OCM2P0CE71 109 aa15.03■□□□□ -0
VPS36-207ENST00000611132 OCMP0CE72 109 aaPredicted RBP15.03■□□□□ -0
VPS36-207ENST00000611132 HIRAP54198 1017 aaPredicted RBP15.03■□□□□ -0
VPS36-207ENST00000611132 CNPY1Q3B7I2 92 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
VPS36-207ENST00000611132 KRT27Q7Z3Y8 459 aa15.03■□□□□ -0
VPS36-207ENST00000611132 CALML6Q8TD86 181 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SKA2Q8WVK7 121 aaPredicted RBP15.03■□□□□ -0
VPS36-207ENST00000611132 CCDC126Q96EE4 140 aa15.03■□□□□ -0
VPS36-207ENST00000611132 MFSD14AQ96MC6 490 aa15.03■□□□□ -0
VPS36-207ENST00000611132 DACH2Q96NX9 599 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SEMA6AQ9H2E6 1030 aa15.03■□□□□ -0
VPS36-207ENST00000611132 PALMDQ9NP74 551 aa15.03■□□□□ -0
VPS36-207ENST00000611132 XPNPEP3Q9NQH7 507 aa15.03■□□□□ -0
VPS36-207ENST00000611132 PIH1D1Q9NWS0 290 aaKnown RBP15.03■□□□□ -0
VPS36-207ENST00000611132 PSMD13Q9UNM6 376 aa15.03■□□□□ -0
VPS36-207ENST00000611132 DMTF1Q9Y222 760 aa15.03■□□□□ -0
VPS36-207ENST00000611132 DDHD2O94830 711 aa15.03■□□□□ -0
VPS36-207ENST00000611132 HMGCRP04035 888 aa15.03■□□□□ -0
VPS36-207ENST00000611132 RAB27AP51159 221 aa15.03■□□□□ -0
VPS36-207ENST00000611132 KCNK10P57789 538 aa15.03■□□□□ -0
VPS36-207ENST00000611132 PGM5Q15124 567 aa15.03■□□□□ -0
VPS36-207ENST00000611132 LRRC8BQ6P9F7 803 aa15.03■□□□□ -0
VPS36-207ENST00000611132 TTC7BQ86TV6 843 aa15.03■□□□□ -0
VPS36-207ENST00000611132 PLD3Q8IV08 490 aa15.03■□□□□ -0
VPS36-207ENST00000611132 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
VPS36-207ENST00000611132 IPMKQ8NFU5 416 aa15.03■□□□□ -0
VPS36-207ENST00000611132 PXMP2Q9NR77 195 aa15.03■□□□□ -0
VPS36-207ENST00000611132 RABGEF1Q9UJ41 708 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SUPT7LO94864 414 aa15.03■□□□□ -0
VPS36-207ENST00000611132 KRT8P05787 483 aa15.03■□□□□ -0
VPS36-207ENST00000611132 KCNA2P16389 499 aa15.03■□□□□ -0
VPS36-207ENST00000611132 POLD1P28340 1107 aa15.03■□□□□ -0
VPS36-207ENST00000611132 CAP2P40123 477 aa15.03■□□□□ -0
VPS36-207ENST00000611132 MRPS15P82914 257 aaKnown RBP15.03■□□□□ -0
VPS36-207ENST00000611132 CDC16Q13042 620 aa15.03■□□□□ -0
VPS36-207ENST00000611132 NAB1Q13506 487 aa15.03■□□□□ -0
VPS36-207ENST00000611132 TLDC1Q6P9B6 456 aa15.03■□□□□ -0
VPS36-207ENST00000611132 MPZL3Q6UWV2 235 aa15.03■□□□□ -0
VPS36-207ENST00000611132 MBOAT7Q96N66 472 aa15.03■□□□□ -0
VPS36-207ENST00000611132 CPNE1Q99829 537 aa15.03■□□□□ -0
VPS36-207ENST00000611132 SPATA16Q9BXB7 569 aa15.03■□□□□ -0
VPS36-207ENST00000611132 CYP3A43Q9HB55 503 aa15.03■□□□□ -0
VPS36-207ENST00000611132 NOD1Q9Y239 953 aa15.03■□□□□ -0
VPS36-207ENST00000611132 UBA6A0AVT1 1052 aaPredicted RBP15.02■□□□□ -0
VPS36-207ENST00000611132 CLOCKO15516 846 aa15.02■□□□□ -0
VPS36-207ENST00000611132 FASP25445 335 aa15.02■□□□□ -0
VPS36-207ENST00000611132 C6orf10Q5SRN2 563 aa15.02■□□□□ -0
VPS36-207ENST00000611132 KCNT2Q6UVM3 1135 aa15.02■□□□□ -0
VPS36-207ENST00000611132 CYP2R1Q6VVX0 501 aa15.02■□□□□ -0
VPS36-207ENST00000611132 LINC00523Q86TU6 105 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms