RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 LSM14BQ9BX40 385 aaKnown RBP23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 VPS16Q9H269 839 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 STOML2Q9UJZ1 356 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 CLEC4EQ9ULY5 219 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 NAALADL1Q9UQQ1 740 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 EP300Q09472 2414 aaPredicted RBP23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 PLXND1Q9Y4D7 1925 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 GFRA2O00451 464 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 NCAM1P13591 858 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 HARS2P49590 506 aaKnown RBP23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 PTK2Q05397 1052 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 LAIR1Q6GTX8 287 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 PASD1Q8IV76 773 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 ZNF513Q8N8E2 541 aaPredicted RBP23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 TSTD1Q8NFU3 115 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 DQX1Q8TE96 717 aaKnown RBP23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 LHX5Q9H2C1 402 aa23.28■■□□□ 1.32
GTF2F1-204ENST00000594965 RPP40O75818 363 aaKnown RBP23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 TGM1P22735 817 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 SYPL2Q5VXT5 272 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 EGFLAMQ63HQ2 1017 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 BEND5Q7L4P6 421 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 FAM160A2Q8N612 972 aaPredicted RBP23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 GOLGA1Q92805 767 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 PIWIL1Q96J94 861 aaKnown RBP23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 CPXM1Q96SM3 734 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 RAB23Q9ULC3 237 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 SLC27A6Q9Y2P4 619 aa23.27■■□□□ 1.32
GTF2F1-204ENST00000594965 GVINP1Q7Z2Y8 2422 aa23.27■■□□□ 1.31
GTF2F1-204ENST00000594965 CFAP54Q96N23 3096 aa23.27■■□□□ 1.31
GTF2F1-204ENST00000594965 SART1O43290 800 aaKnown RBP23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 LATS1O95835 1130 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 UCHL3P15374 230 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 KLK7P49862 253 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 DGKEP52429 567 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 RAPGEF1Q13905 1077 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 NCAPHQ15003 741 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 EOGTQ5NDL2 527 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 NUDT18Q6ZVK8 323 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 CEP68Q76N32 757 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 KIAA2013Q8IYS2 634 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 MDGA1Q8NFP4 955 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 FAM149B1Q96BN6 582 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 ACOX2Q99424 681 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 GANQ9H2C0 597 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 GMEB2Q9UKD1 530 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 THADAQ6YHU6 1953 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 ZNF292O60281 2723 aa23.26■■□□□ 1.31
GTF2F1-204ENST00000594965 TBX4P57082 545 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 MYL5Q02045 173 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 RING1Q06587 406 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 TAF5Q15542 800 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 ADGRF1Q5T601 910 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 ANO7Q6IWH7 933 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 KBTBD6Q86V97 674 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 ABCA7Q8IZY2 2146 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 C1orf131Q8NDD1 294 aaKnown RBP23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 DDI1Q8WTU0 396 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 SLC39A13Q96H72 371 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 PPP1R13BQ96KQ4 1090 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 FCRL2Q96LA5 508 aaPredicted RBP23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 PARD6AQ9NPB6 346 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 PLCB1Q9NQ66 1216 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 CEP192Q8TEP8 1941 aa23.25■■□□□ 1.31
GTF2F1-204ENST00000594965 DCLK1O15075 740 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 TSPAN3O60637 253 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 CYBBP04839 570 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 HOXD9P28356 352 aaPredicted RBP23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 SGSHP51688 502 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 COPB1P53618 953 aaKnown RBP23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 TYRO3Q06418 890 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 GEN1Q17RS7 908 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 TAC4Q86UU9 113 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 ADAM32Q8TC27 787 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 STK33Q9BYT3 514 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 TPSD1Q9BZJ3 242 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 POPDC2Q9HBU9 364 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 CD248Q9HCU0 757 aa23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 LIMA1Q9UHB6 759 aaKnown RBP23.24■■□□□ 1.31
GTF2F1-204ENST00000594965 NUP205Q92621 2012 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 GOLGA6L7A0A1B0GV03 622 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 IGLV3-25P01717 112 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 RETP07949 1114 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 CYP11B1P15538 503 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 ZNF18P17022 549 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 NTSR1P30989 418 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 SLC6A4P31645 630 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 KRT9P35527 623 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 WASP42768 502 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 BPIFB4P59827 614 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 YWHAZP63104 245 aaKnown RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 PITX1P78337 314 aaPredicted RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 NNTQ13423 1086 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 PTPN20Q4JDL3 420 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 MPPE1Q53F39 396 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 FAM133BQ5BKY9 247 aaKnown RBP23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 NUGGCQ68CJ6 796 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 NADSYN1Q6IA69 706 aa23.23■■□□□ 1.31
GTF2F1-204ENST00000594965 CACNA2D4Q7Z3S7 1137 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms