RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 FYB2Q5VWT5 728 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 LAIR1Q6GTX8 287 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 ADAM32Q8TC27 787 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 ERLEC1Q96DZ1 483 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 P2RY11Q96G91 374 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 TPSD1Q9BZJ3 242 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.37
SREBF1-219ENST00000580540 SDK1Q7Z5N4 2213 aa17.33■□□□□ 0.37
SREBF1-219ENST00000580540 MYO18AQ92614 2054 aaKnown RBP17.33■□□□□ 0.37
SREBF1-219ENST00000580540 PRRT4C9JH25 899 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 ALDH1A2O94788 518 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 CISD3P0C7P0 127 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 HNRNPLP14866 589 aaKnown RBP eCLIP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 BPIFB4P59827 614 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 MYL5Q02045 173 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 HSF5Q4G112 596 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 EGFLAMQ63HQ2 1017 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 SDE2Q6IQ49 451 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 DPY19L2P1Q6NXN4 242 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 TRMT11Q7Z4G4 463 aaKnown RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 TMEM110Q86TL2 294 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 UNC45BQ8IWX7 931 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 FAM71AQ8IYT1 594 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 PGBD3Q8N328 593 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 CPXM2Q8N436 756 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 WDTC1Q8N5D0 677 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 C1orf131Q8NDD1 294 aaKnown RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 ANKRD20A12PQ8NF67 263 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 DQX1Q8TE96 717 aaKnown RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 PPP1R13BQ96KQ4 1090 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 PCMTD1Q96MG8 357 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 NOX5Q96PH1 765 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 SYNCQ9H7C4 482 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 POLMQ9NP87 494 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 PLCB1Q9NQ66 1216 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 BCCIPQ9P287 314 aaKnown RBP eCLIP17.33■□□□□ 0.36
SREBF1-219ENST00000580540 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 USP18Q9UMW8 372 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 CEP83Q9Y592 693 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 KIAA1549LQ6ZVL6 1849 aa17.33■□□□□ 0.36
SREBF1-219ENST00000580540 FAM170AA1A519 330 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 DCLK1O15075 740 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 ADAM23O75077 832 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 PENKP01210 267 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-219ENST00000580540 FYNP06241 537 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 UCHL3P15374 230 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 KLK7P49862 253 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 TYRO3Q06418 890 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 SPEM2Q0P670 501 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 MPPE1Q53F39 396 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 ADGRF1Q5T601 910 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 TAF3Q5VWG9 929 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 SYPL2Q5VXT5 272 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 NUGGCQ68CJ6 796 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 OR6B2Q6IFH4 312 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 CAVIN1Q6NZI2 390 aaKnown RBP17.32■□□□□ 0.36
SREBF1-219ENST00000580540 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 KBTBD6Q86V97 674 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 FAM160A2Q8N612 972 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-219ENST00000580540 KCNV2Q8TDN2 545 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
SREBF1-219ENST00000580540 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 ACOX2Q99424 681 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 TRIM62Q9BVG3 475 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 EBF1Q9UH73 591 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 CLEC4EQ9ULY5 219 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 PCDHGC3Q9UN70 934 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 WDR87Q6ZQQ6 2873 aa17.32■□□□□ 0.36
SREBF1-219ENST00000580540 GVINP1Q7Z2Y8 2422 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 GOLGA6L7A0A1B0GV03 622 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 TCRBV21S2A2A0A5A6 115 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 CHRM1P11229 460 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-219ENST00000580540 HOXB2P14652 356 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 NTSR1P30989 418 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 GBP1P32455 592 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 SLC11A2P49281 568 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 COPB1P53618 953 aaKnown RBP17.31■□□□□ 0.36
SREBF1-219ENST00000580540 YWHAZP63104 245 aaKnown RBP17.31■□□□□ 0.36
SREBF1-219ENST00000580540 TAF5Q15542 800 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 USP39Q53GS9 565 aaKnown RBP17.31■□□□□ 0.36
SREBF1-219ENST00000580540 MDGA1Q8NFP4 955 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 HMGB4Q8WW32 186 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 SERPINB11Q96P15 392 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 LHX5Q9H2C1 402 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 POPDC2Q9HBU9 364 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-219ENST00000580540 FBXO10Q9UK96 956 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 HCN2Q9UL51 889 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 STARD13Q9Y3M8 1113 aa17.31■□□□□ 0.36
SREBF1-219ENST00000580540 SYNJ2BP-COX16A0A087WUM0 186 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 ACSL4O60488 711 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 GRAP2O75791 330 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 MOCS2O96007 188 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 RETP07949 1114 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 CYP11B1P15538 503 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms