RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 A0A0X1KG70 313 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 ZNF839A8K0R7 811 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 THOP1P52888 689 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 USP13Q92995 863 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 MLPHQ9BV36 600 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 VPS45Q9NRW7 570 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 RWDD3Q9Y3V2 267 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 OTOL1A6NHN0 477 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 LARGE1O95461 756 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 RPL4P36578 427 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 CASP9P55211 416 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 LIN54Q6MZP7 749 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 PPP1R18Q6NYC8 613 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 DDX18Q9NVP1 670 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1A-202ENST00000573710 PPP2R2BQ00005 443 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 PLD1Q13393 1074 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 SCARF1Q14162 830 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZNF285Q96NJ3 590 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 TLR8Q9NR97 1041 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ABHD14A-ACY1A0A1B0GW23 586 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 H7C4K7 107 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 BST2Q10589 180 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ARSHQ5FYA8 562 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 SH3BGRL2Q9UJC5 107 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 BCLAF3A2AJT9 711 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 GTPBP1O00178 669 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 KMOO15229 486 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZNF208O43345 1280 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 RHOCP08134 193 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 AMPD2Q01433 879 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 OASLQ15646 514 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 CTXN3Q4LDR2 81 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 TTC39CQ8N584 583 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 FKBP14Q9NWM8 211 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 DGCR6Q14129 220 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 MCIDASD6RGH6 385 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 MTA2O94776 668 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 NR6A1Q15406 480 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 SULT1C3Q6IMI6 304 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 TPGS1Q6ZTW0 290 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 FAM124AQ86V42 546 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 KBTBD2Q8IY47 623 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZNF611Q8N823 705 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 PRRG3Q9BZD7 231 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 SLC12A8A0AV02 714 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 EFNA5P52803 228 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 IRX1P78414 480 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 AP5B1Q2VPB7 878 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 GPAT3Q53EU6 434 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 FAM220AQ7Z4H9 259 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ZSWIM2Q8NEG5 633 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 ACTR8Q9H981 624 aa16.25■□□□□ 0.19
CACNA1A-202ENST00000573710 CPA3P15088 417 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 GPD1P21695 349 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 NUP107P57740 925 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 ATXN3LQ9H3M9 355 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 SUCOQ9UBS9 1254 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 OXCT1P55809 520 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 SQLEQ14534 574 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 FAR1Q8WVX9 515 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 DNAJC9Q8WXX5 260 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 ING5Q8WYH8 240 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 RASSF1Q9NS23 344 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 PSMC3IPQ9P2W1 217 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 C21orf59P57076 290 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 ITGB3BPQ13352 177 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 LINC00301Q8NCQ3 95 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 OXER1Q8TDS5 423 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 AASDHPPTQ9NRN7 309 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 HNF4AP41235 474 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 RAP1GAPP47736 663 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 QRICH1Q2TAL8 776 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 TBC1D25Q3MII6 688 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
CACNA1A-202ENST00000573710 CCDC177Q9NQR7 707 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms