RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RTEL1Q9NZ71 1219 aa6.16□□□□□ -1.42
SF3B3-214ENST00000572365 PCDHA1Q9Y5I3 950 aa6.16□□□□□ -1.42
SF3B3-214ENST00000572365 BPTFQ12830 3046 aa6.16□□□□□ -1.42
SF3B3-214ENST00000572365 ISM1B1AKI9 464 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PROB1E7EW31 1015 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 NBNO60934 754 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 CIAO1O76071 339 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 LDHAP00338 332 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 SBK3P0C264 359 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 MTHFD1P11586 935 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 EEF2P13639 858 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 ATP5JP18859 108 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PIK3CGP48736 1102 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 LONRF1Q17RB8 773 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 BMT2Q1RMZ1 405 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 FAM214AQ32MH5 1076 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 TOGARAM2Q6ZUX3 1019 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 RBM23Q86U06 439 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 MYOCDQ8IZQ8 938 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 MORC4Q8TE76 937 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PARD3BQ8TEW8 1205 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PHKBQ93100 1093 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 ARL8AQ96BM9 186 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 LRRC37BQ96QE4 947 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 NDC1Q9BTX1 674 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 VCPKMTQ9H867 229 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PIH1D1Q9NWS0 290 aaKnown RBP6.15□□□□□ -1.42
SF3B3-214ENST00000572365 CD207Q9UJ71 328 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 CDH22Q9UJ99 828 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 ZDHHC8Q9ULC8 765 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 PCDHA6Q9UN73 950 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 ADAMTS5Q9UNA0 930 aa6.15□□□□□ -1.42
SF3B3-214ENST00000572365 TANC1Q9C0D5 1861 aa6.15□□□□□ -1.43
SF3B3-214ENST00000572365 CACNA1IQ9P0X4 2223 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 NBEAQ8NFP9 2946 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 ZZEF1O43149 2961 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 LAMTOR5O43504 91 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 SLC43A1O75387 559 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 IDH1O75874 414 aaKnown RBP6.14□□□□□ -1.43
SF3B3-214ENST00000572365 CABYRO75952 493 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 MATN4O95460 622 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 NBL1P41271 181 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 PIK3CBP42338 1070 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 ARFIP2P53365 341 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 RRP1P56182 461 aaKnown RBP6.14□□□□□ -1.43
SF3B3-214ENST00000572365 CLRN1P58418 232 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 ICA1Q05084 483 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 SIGLEC14Q08ET2 396 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 PTGISQ16647 500 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 TTC39AQ5SRH9 613 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 ANKS6Q68DC2 871 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 TAPT1Q6NXT6 567 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 GPRIN1Q7Z2K8 1008 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 CELF5Q8N6W0 485 aaKnown RBP6.14□□□□□ -1.43
SF3B3-214ENST00000572365 SDR42E1Q8WUS8 393 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 TNIP3Q96KP6 325 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 RIPOR3Q96MK2 946 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 RSAD1Q9HA92 442 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 NLRC4Q9NPP4 1024 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 MCM9Q9NXL9 1143 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 TMX2Q9Y320 296 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 DUSP10Q9Y6W6 482 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 R4GN57 208 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 MYH4Q9Y623 1939 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 SCN10AQ9Y5Y9 1956 aa6.14□□□□□ -1.43
SF3B3-214ENST00000572365 TCRBV7S2A1N4TA0A589 114 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 PRSS29PA6NIE9 313 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 TBKBP1A7MCY6 615 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 H3BNC9 293 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 FOXN3O00409 490 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 PI15O43692 258 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 PRKAB2O43741 272 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 EIF3JO75822 258 aaKnown RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 AHSGP02765 367 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 INHBBP09529 407 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 SUPT20HL2P0C7V6 817 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 UBTFL1P0CB47 393 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 KITP10721 976 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 SERPINB3P29508 390 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 SLC7A1P30825 629 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 SLC6A4P31645 630 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 PRIM2P49643 509 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 NDUFV1P49821 464 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 CASP5P51878 434 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 LONRF3Q496Y0 759 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 FKBP15Q5T1M5 1219 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 ZNF529Q6P280 563 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 APBB1IPQ7Z5R6 666 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 ADGRD2Q7Z7M1 963 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 SRLQ86TD4 932 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 TAX1BP1Q86VP1 789 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 FAM186BQ8IYM0 893 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 FAM133AQ8N9E0 248 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 NLGN4YQ8NFZ3 816 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms