RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C2CD2LO14523 706 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 MCF2LO15068 1137 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 ARL4AP40617 200 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 CALCOCO2Q13137 446 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 SEMA3BQ13214 749 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 RHBDF2Q6PJF5 856 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 CCHCR1Q8TD31 782 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 RNF139Q8WU17 664 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 BADQ92934 168 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 SMOC2Q9H3U7 446 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 WDCPQ9H6R7 721 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 SPG21Q9NZD8 308 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 FAM72CH0Y354 149 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 PPIGQ13427 754 aaKnown RBP eCLIP20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 FAM72AQ5TYM5 149 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 FAM72DQ6L9T8 149 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 FAM72BQ86X60 149 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 PCDH9Q9HC56 1237 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 ARHGEF4Q9NR80 690 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 ETNK2Q9NVF9 386 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 HEY1Q9Y5J3 304 aa20.28■□□□□ 0.84
RBFOX1-215ENST00000553186 IRAK2O43187 625 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 PPFIA2O75334 1257 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 FGBP02675 491 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 ZFXP17010 805 aaPredicted RBP20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 AMPD1P23109 780 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 GBE1Q04446 702 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 SLC10A2Q12908 348 aaPredicted RBP20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 NCBP2-AS2Q69YL0 99 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 ZC3H18Q86VM9 953 aaKnown RBP20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 UNC45BQ8IWX7 931 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 CASP10Q92851 521 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 ZBTB9Q96C00 473 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 LRRC45Q96CN5 670 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 TKTL2Q9H0I9 626 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 ADAM7Q9H2U9 754 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 GMIPQ9P107 970 aa20.27■□□□□ 0.84
RBFOX1-215ENST00000553186 AGPSO00116 658 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 GJB5O95377 273 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 LINC00271P0C7V0 271 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 ATF6P18850 670 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 YWHAQP27348 245 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 GLUD2P49448 558 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 ITGA8P53708 1063 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 DHX9Q08211 1270 aaKnown RBP20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 MTMR3Q13615 1198 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 UAP1Q16222 522 aaPredicted RBP20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 ARL13BQ3SXY8 428 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 IQCKQ8N0W5 287 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 SFMBT1Q9UHJ3 866 aa20.27■□□□□ 0.83
RBFOX1-215ENST00000553186 CARNS1A5YM72 827 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 ZBBXA8MT70 800 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 H3BRJ5 948 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 RTN3O95197 1032 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 IFNB1P01574 187 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 RPL10AP62906 217 aaKnown RBP20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 FPGSQ05932 587 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 DPYSQ14117 519 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 B4GALNT4Q76KP1 1039 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 KRT222Q8N1A0 295 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 CXXC1Q9P0U4 656 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 MTRF1LQ9UGC7 380 aaKnown RBP20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 PRKAG2Q9UGJ0 569 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 NUDT5Q9UKK9 219 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 MFHAS1Q9Y4C4 1052 aa20.26■□□□□ 0.83
RBFOX1-215ENST00000553186 CREB3O43889 395 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 ABLIM3O94929 683 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 MAP3K6O95382 1288 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 HSD17B3P37058 310 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 NR2C2P49116 596 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 P3H1Q32P28 736 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 RFX8Q6ZV50 586 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 ARHGAP18Q8N392 663 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 FAM71DQ8N9W8 422 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 ZNF461Q8TAF7 563 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 RSAD2Q8WXG1 361 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 PRDM16Q9HAZ2 1276 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 USP29Q9HBJ7 922 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 COMMD8Q9NX08 183 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 ARHGEF38Q9NXL2 777 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 AFF4Q9UHB7 1163 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 MSI1O43347 362 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 STIP1P31948 543 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 TAF10Q12962 218 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 GPS1Q13098 491 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 ALS2CLQ60I27 953 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 MSANTD2Q6P1R3 559 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 DARS2Q6PI48 645 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 FBXO32Q969P5 355 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 AAASQ9NRG9 546 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 DTLQ9NZJ0 730 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 PLXNA3P51805 1871 aa20.25■□□□□ 0.83
RBFOX1-215ENST00000553186 PTPRSQ13332 1948 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 GOLGA6BA6NDN3 693 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 EEF2KO00418 725 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 HCAR3P49019 387 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms