RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TRIM74Q86UV6 250 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 TRIM73Q86UV7 250 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 TRIM42Q8IWZ5 723 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 ARHGAP18Q8N392 663 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 C17orf75Q9HAS0 396 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 XAB2Q9HCS7 855 aaKnown RBP12.77□□□□□ -0.36
HDAC7-230ENST00000552960 S100A14Q9HCY8 104 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 ETNK2Q9NVF9 386 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 FETUBQ9UGM5 382 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 USP18Q9UMW8 372 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 POLIQ9UNA4 740 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 ITM2AO43736 263 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 KRT38O76015 456 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 CSH1P0DML2 217 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 CSH2P0DML3 217 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 GMPRP36959 345 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ZC3H12AQ5D1E8 599 aaKnown RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 HPS6Q86YV9 775 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 DEFB107AQ8IZN7 70 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 HIC2Q96JB3 615 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 SPATA33Q96N06 139 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 CPXM1Q96SM3 734 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 GPR20Q99678 358 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 SMYD2Q9NRG4 433 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 PLA2G4CQ9UP65 541 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 A0A088AWK7 358 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 IGKV6D-21A0A0A0MT36 114 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ZBED1O96006 694 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 RBL1P28749 1068 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 MSX2P35548 267 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 CRADDP78560 199 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 C15orf59Q2T9L4 293 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF699Q32M78 642 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ARMCX2Q7L311 632 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 SPATA24Q86W54 205 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 RDM1Q8NG50 284 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 RNPEPQ9H4A4 650 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 PREBQ9HCU5 417 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 CYTH4Q9UIA0 394 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
HDAC7-230ENST00000552960 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 SLC25A27O95847 323 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 RAG1P15918 1043 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 CRABP2P29373 138 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 ADCYAP1R1P41586 468 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 METTL7BQ6UX53 244 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 MPP4Q96JB8 637 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 CCDC106Q9BWC9 280 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 KLHL4Q9C0H6 718 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 MAN1C1Q9NR34 630 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 DDX18Q9NVP1 670 aaKnown RBP12.76□□□□□ -0.37
HDAC7-230ENST00000552960 PFDN1O60925 122 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 RFPL1O75677 317 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 VCLP18206 1134 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 STIP1P31948 543 aaKnown RBP12.76□□□□□ -0.37
HDAC7-230ENST00000552960 BTKQ06187 659 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 PRAMEF19Q5SWL8 479 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 OLFML2BQ68BL8 750 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 SH2D5Q6ZV89 423 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 STKLD1Q8NE28 680 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 UBA3Q8TBC4 463 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 PIP4K2CQ8TBX8 421 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 SLC7A3Q8WY07 619 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-230ENST00000552960 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 C7orf26Q96N11 449 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 DHX33Q9H6R0 707 aaKnown RBP12.76□□□□□ -0.37
HDAC7-230ENST00000552960 NGRNQ9NPE2 291 aaKnown RBP12.76□□□□□ -0.37
HDAC7-230ENST00000552960 CPA4Q9UI42 421 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 LAMA3Q16787 3333 aa12.76□□□□□ -0.37
HDAC7-230ENST00000552960 CAPN8A6NHC0 703 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ADCY6O43306 1168 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 COPAP53621 1224 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 CELF3Q5SZQ8 465 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 SLFN12LQ6IEE8 588 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 PPP1R2P3Q6NXS1 205 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 PRPF31Q8WWY3 499 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ABTB1Q969K4 478 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ADPGKQ9BRR6 497 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 IL1RAPL1Q9NZN1 696 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 TCRBV5S1A1TA0A578 114 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms