RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TTC39BQ5VTQ0 682 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-214ENST00000540113 ARHGAP17Q68EM7 881 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 CLNKQ7Z7G1 428 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 TTC7BQ86TV6 843 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 TEKT4Q8WW24 435 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 N4BP2L2Q92802 583 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-214ENST00000540113 FAM149B1Q96BN6 582 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 CSPG4P5Q96PW8 444 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 TMEM120AQ9BXJ8 343 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 VPS11Q9H270 941 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 LRMDAQ9H2I8 198 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 PCMTD2Q9NV79 361 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 ARL8BQ9NVJ2 186 aa11.92□□□□□ -0.5
C11orf54-214ENST00000540113 PIN4Q9Y237 131 aaKnown RBP11.92□□□□□ -0.5
C11orf54-214ENST00000540113 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 HAS3O00219 553 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 C2CD2LO14523 706 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 TREHO43280 583 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 BEST1O76090 585 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 KITP10721 976 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 VAV1P15498 845 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 GMPRP36959 345 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SERPINB4P48594 390 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 PSEN2P49810 448 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 NDUFV1P49821 464 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 MRPS5P82675 430 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 CST9Q5W186 159 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 NCBP2-AS2Q69YL0 99 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 FAM13CQ8NE31 585 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 GIMAP7Q8NHV1 300 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 TTC8Q8TAM2 541 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 RTP4Q96DX8 246 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SIGLEC10Q96LC7 697 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 DTLQ9NZJ0 730 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 HMX2A2RU54 273 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 H0Y3Z8 333 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SMAPO00193 183 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 MDM4O15151 490 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 RFPL1O75677 317 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 APOEP02649 317 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 DHRS4L1P0CG22 281 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SKIV2L2P42285 1042 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 ARFIP2P53365 341 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 BEX3Q00994 111 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 PRKD1Q15139 912 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 SLC45A4Q5BKX6 768 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 FBXO47Q5MNV8 452 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 RFWD3Q6PCD5 774 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 UNC93AQ86WB7 457 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 DEFB106AQ8N104 65 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 ALKBH8Q96BT7 664 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
C11orf54-214ENST00000540113 UBQLN1Q9UMX0 589 aaKnown RBP11.91□□□□□ -0.5
C11orf54-214ENST00000540113 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 WDR27A2RRH5 827 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 EIF4E1BA6NMX2 242 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 KPNA7A9QM74 516 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 SNRPAP09012 282 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ADIGQ0VDE8 80 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 MDH1BQ5I0G3 518 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CASC4Q6P4E1 433 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ZCCHC23Q6ZST2 131 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 OSTM1Q86WC4 334 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ANKRD52Q8NB46 1076 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 USP6NLQ92738 828 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 MIPEPQ99797 713 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 EBF2Q9HAK2 575 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CREB3O43889 395 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 MFSD11O43934 449 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ENTPD5O75356 428 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 MYL2P10916 166 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 TSHRP16473 764 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CCND1P24385 295 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CPA2P48052 419 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 SULT1E1P49888 294 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 SESN2P58004 480 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CDC42EP1Q00587 391 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ZBTB16Q05516 673 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 NME3Q13232 169 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 DCAF6Q58WW2 860 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms