RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 FAM71DQ8N9W8 422 aa6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 ZNF764Q96H86 408 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 CRAMP1Q96RY5 1269 aa6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 RNF26Q9BY78 433 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 EPS8L2Q9H6S3 715 aa6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 USP29Q9HBJ7 922 aa6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 PTPRHQ9HD43 1115 aa6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 UBE2J1Q9Y385 318 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-217ENST00000504211 POLR2AP24928 1970 aaKnown RBP6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 CEP162Q5TB80 1403 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 CCDC187A0A096LP49 1063 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 MANSC4A6NHS7 340 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 UBE2Q2LH0YL09 131 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 M0QZQ0 153 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 GCATO75600 419 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 USP1O94782 785 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 MATN1P21941 496 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 JAK3P52333 1124 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 TUBA4AP68366 448 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 SLC10A2Q12908 348 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 BFSP2Q13515 415 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 TRIM14Q14142 442 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 KCNB1Q14721 858 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 CCDC38Q502W7 563 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 LIN54Q6MZP7 749 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 ERAP2Q6P179 960 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 ACSM6Q6P461 480 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 SERPINA13PQ6UXR4 307 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 ATG16L2Q8NAA4 619 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 OR52L2PQ8NGH6 319 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 WDR60Q8WVS4 1066 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 HIC2Q96JB3 615 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 ASB2Q96Q27 587 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 ABHD10Q9NUJ1 306 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 DACT1Q9NYF0 836 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 NFU1Q9UMS0 254 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 SCAF8Q9UPN6 1271 aaKnown RBP6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 PCDHB2Q9Y5E7 798 aa6.78□□□□□ -1.32
UBE2D3-217ENST00000504211 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 TRIM38O00635 465 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 DNPH1O43598 174 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 TCEA3O75764 348 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 LATS1O95835 1130 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 ITGA2BP08514 1039 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 FBLP22087 321 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 KLRK1P26718 216 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 DUSP1P28562 367 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 IGHMBP2P38935 993 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 MFSD13AQ14CX5 517 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 ELF2Q15723 593 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 GRAMD1BQ3KR37 738 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 CERKLQ49MI3 558 aaPredicted RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 TANGO2Q6ICL3 276 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 TMEM65Q6PI78 240 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 TRABD2AQ86V40 505 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 PNISRQ8TF01 805 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 GLMPQ8WWB7 406 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 DPF1Q92782 380 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 CCDC17Q96LX7 622 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 HS6ST2Q96MM7 605 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 EIF3CQ99613 913 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 FBXO28Q9NVF7 368 aa6.77□□□□□ -1.33
UBE2D3-217ENST00000504211 PRRT4C9JH25 899 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 CLIC1O00299 241 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 FYB1O15117 783 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 PPFIA2O75334 1257 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 RPP40O75818 363 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 POLE2P56282 527 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 P3H1Q32P28 736 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 RINT1Q6NUQ1 792 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 VSTM1Q6UX27 236 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 ZNF782Q6ZMW2 699 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 PNLDC1Q8NA58 520 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 OR1N1Q8NGS0 311 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 STT3BQ8TCJ2 826 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 ZNF398Q8TD17 642 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 SLC22A17Q8WUG5 538 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 NPIPB3Q92617 1050 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 RTKNQ9BST9 563 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 MAGEH1Q9H213 219 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 LRFN1Q9P244 771 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 PTGFRNQ9P2B2 879 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 HERC5Q9UII4 1024 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 DNMBPQ6XZF7 1577 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 KIF27Q86VH2 1401 aa6.76□□□□□ -1.33
UBE2D3-217ENST00000504211 PRXQ9BXM0 1461 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 LOC105369274A0A096LPK9 316 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 LOC102723532A0A0G2JNH3 316 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A9PA6NNJ1 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FCHO1O14526 889 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 CER1O95813 267 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 CYP2A6P11509 494 aaPredicted RBP6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 ALADP13716 330 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms