RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ORAI3Q9BRQ5 295 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 VRTNQ9H8Y1 702 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC6-236ENST00000498808 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 PCDHGA1Q9Y5H4 931 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 MYLKQ15746 1914 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 A0A087X0B3 334 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 A0A1W2PQH9 124 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 HHLA1C9JL84 531 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 J3QKU1 62 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 TGFB1I1O43294 461 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 RARGP13631 454 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 EIF4HQ15056 248 aaKnown RBP16.42■□□□□ 0.22
HDAC6-236ENST00000498808 BRAPQ7Z569 592 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
HDAC6-236ENST00000498808 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 AGPAT3Q9NRZ7 376 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 HMGXB4Q9UGU5 601 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 DNMT3LQ9UJW3 386 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 AK5Q9Y6K8 562 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 COL6A6A6NMZ7 2263 aa16.42■□□□□ 0.22
HDAC6-236ENST00000498808 MYO18BQ8IUG5 2567 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 A0A1B0GTQ1 180 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 TEX51A0A1B0GUA7 166 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 ENC1O14682 589 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 RRP8O43159 456 aaKnown RBP16.41■□□□□ 0.22
HDAC6-236ENST00000498808 TSPAN3O60637 253 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 C7P10643 843 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 HNF1BP35680 557 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CYP2J2P51589 502 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CFHR1Q03591 330 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.225e-7■■■■■ 33.1
HDAC6-236ENST00000498808 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-236ENST00000498808 RTP5Q14D33 572 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 ZNF699Q32M78 642 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 INAVAQ3KP66 663 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 C10orf120Q5SQS8 335 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 GPR155Q7Z3F1 870 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 GATAD2AQ86YP4 633 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 TMX3Q96JJ7 454 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
HDAC6-236ENST00000498808 MGAQ8IWI9 3026 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 PLXNA2O75051 1894 aa16.41■□□□□ 0.22
HDAC6-236ENST00000498808 CAPN9O14815 690 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 CLIC2O15247 247 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 SEMA4FO95754 770 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 CD27P26842 260 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 TXLNAP40222 546 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 STAT6P42226 847 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 ZNF667Q5HYK9 610 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 PRAMEF14Q5SWL7 426 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 HES3Q5TGS1 186 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 CLEC20AQ6ZU45 233 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 C12orf29Q8N999 325 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 JAKMIP2Q96AA8 810 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 NRSN2Q9GZP1 204 aa16.4■□□□□ 0.22
HDAC6-236ENST00000498808 EIF3DO15371 548 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC6-236ENST00000498808 PHACTR2O75167 634 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 RFPL3O75679 317 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 FSBPO95073 299 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 CHKAP35790 457 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 CASP4P49662 377 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 ACADVLP49748 655 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 TLE3Q04726 772 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 EPM2AIP1Q7L775 607 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-236ENST00000498808 SCD5Q86SK9 330 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 CRYBG2Q8N1P7 616 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 ZNF366Q8N895 744 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 ZNF507Q8TCN5 953 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 BAP1Q92560 729 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
HDAC6-236ENST00000498808 BTBD1Q9H0C5 482 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 ZNF510Q9Y2H8 683 aa16.39■□□□□ 0.21
HDAC6-236ENST00000498808 DFNA5O60443 496 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 IGHV4-34P06331 123 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 FAM200BP0CF97 657 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 ADORA2BP29275 332 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 CORO1AP31146 461 aaKnown RBP16.38■□□□□ 0.21
HDAC6-236ENST00000498808 NDST1P52848 882 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 RPS14P62263 151 aaKnown RBP16.38■□□□□ 0.21
HDAC6-236ENST00000498808 E2F5Q15329 346 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 SHBQ15464 509 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 FBXL19Q6PCT2 694 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 ADAT2Q7Z6V5 191 aaKnown RBP16.38■□□□□ 0.21
HDAC6-236ENST00000498808 ELF4Q99607 663 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-236ENST00000498808 TMEM245Q9H330 911 aa16.38■□□□□ 0.21
HDAC6-236ENST00000498808 NAGPAQ9UK23 515 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms