RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZSCAN31Q96LW9 406 aaPredicted RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 PRR25Q96S07 402 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 TTPALQ9BTX7 342 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF747Q9BV97 191 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 RXFP3Q9NSD7 469 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SERTAD4Q9NUC0 356 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 LRIT1Q9P2V4 623 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 ROCK1Q13464 1354 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 PARD3Q8TEW0 1356 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 RNF17Q9BXT8 1623 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 KDM5DQ9BY66 1539 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF608Q9ULD9 1512 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FNDC1Q4ZHG4 1894 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A18PA6NE21 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A16PA6NEW6 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 HMX3A6NHT5 357 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A9PA6NNJ1 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 EFCAB8A8MWE9 144 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A5PA8MXJ8 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 NPIPB8E9PQR5 432 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF500O60304 480 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 RPP40O75818 363 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF202O95125 648 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADH4P08319 380 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A15PP0C7V4 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A14PP0C7W9 464 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 NDUFB7P17568 137 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PAX3P23760 479 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 CTGFP29279 349 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADD2P35612 726 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 GRIA3P42263 894 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 GSTM5P46439 218 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 CDK7P50613 346 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 IRX3P78415 501 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 POU5F1BQ06416 359 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SLC20A2Q08357 652 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 KCNJ12Q14500 433 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 P3H1Q32P28 736 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 AASDHQ4L235 1098 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 CCDC184Q52MB2 194 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 DNTTIP2Q5QJE6 756 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM90A2PQ658T7 463 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 DENND2CQ68D51 928 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 MSANTD2Q6P1R3 559 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 RINLQ6ZS11 566 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PTCHD4Q6ZW05 846 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PEG10Q86TG7 708 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 TRABD2AQ86V40 505 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SUGP1Q8IWZ8 645 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SCAMP5Q8TAC9 235 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ACTRT2Q8TDY3 377 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PNISRQ8TF01 805 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 THAP4Q8WY91 577 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SLC9A6Q92581 669 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SDCCAG3Q96C92 435 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 EVI5LQ96CN4 794 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 EIF3CQ99613 913 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PAAF1Q9BRP4 392 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 PANK2Q9BZ23 570 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SEPSECSQ9HD40 501 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 SAGE1Q9NXZ1 904 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 AMFRQ9UKV5 643 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZHX1Q9UKY1 873 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 DAPP1Q9UN19 280 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 MYRFQ9Y2G1 1151 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 KIF3AQ9Y496 699 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 EPN1Q9Y6I3 576 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 NKTRP30414 1462 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 GRIN2BQ13224 1484 aa4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 EIF4G3O43432 1585 aaKnown RBP4.99□□□□□ -1.61
HMGB1P16-201ENST00000447155 UHRF1BP1Q6BDS2 1440 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 KDM6BO15054 1643 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 GXYLT2A0PJZ3 443 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 GRID2IPA4D2P6 1211 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CTIFO43310 598 aaKnown RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 TMPRSS11DO60235 418 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CER1O95813 267 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 TTLL1O95922 423 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADRA1DP25100 572 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADRA1BP35368 520 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 MAPK9P45984 424 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 SEC24CP53992 1094 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 EFR3AQ14156 821 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 BTBD16Q32M84 506 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 TBC1D25Q3MII6 688 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 ALFQ53S48 1182 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 FBXO47Q5MNV8 452 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 TTC22Q5TAA0 569 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CCDC144NLQ6NUI1 221 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 ANKRD16Q6P6B7 361 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CYP26C1Q6V0L0 522 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 VRK3Q8IV63 474 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 P3H2Q8IVL5 708 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 FTSJ3Q8IY81 847 aaKnown RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 OR6Y1Q8NGX8 325 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 TRAPPC9Q96Q05 1148 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CHMP4BQ9H444 224 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms