RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RSL24D1Q9UHA3 163 aaKnown RBP14.4□□□□□ -0.1
VPS52-212ENST00000445902 RAB26Q9ULW5 256 aa14.4□□□□□ -0.1
VPS52-212ENST00000445902 HEY1Q9Y5J3 304 aa14.4□□□□□ -0.1
VPS52-212ENST00000445902 ADCY6O43306 1168 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 SPAG6O75602 509 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 NAA20P61599 178 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 MRPS9P82933 396 aaKnown RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 TMEM35BQ8NCS4 154 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 PPP4R1Q8TF05 950 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 MOCOSQ96EN8 888 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 LENG8Q96PV6 779 aaPredicted RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 SORT1Q99523 831 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 ANLNQ9NQW6 1124 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 INIPQ9NRY2 104 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 AGO2Q9UKV8 859 aaKnown RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 PIK3R2O00459 728 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 BIRC5O15392 142 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 EXTL3O43909 919 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 F7P08709 466 aaPredicted RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 KRT7P08729 469 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 EIF4BP23588 611 aaKnown RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 RPL10P27635 214 aaKnown RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 PSMD6Q15008 389 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 SH3PXD2AQ5TCZ1 1133 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 ARCQ7LC44 396 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 CPNE9Q8IYJ1 553 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 FAM156AQ8NDB6 213 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 BHLHE22Q8NFJ8 381 aaPredicted RBP14.39□□□□□ -0.11
VPS52-212ENST00000445902 CDRT15Q96T59 188 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 DCUN1D5Q9BTE7 237 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 ZNF358Q9NW07 568 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 ZNF180Q9UJW8 692 aa14.39□□□□□ -0.11
VPS52-212ENST00000445902 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 STX16-NPEPL1H3BU86 382 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 NEMP1O14524 444 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 CST3P01034 146 aaPredicted RBP14.38□□□□□ -0.11
VPS52-212ENST00000445902 THRAP10827 490 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 FGFR3P22607 806 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 GRIA1P42261 906 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
VPS52-212ENST00000445902 CRADDP78560 199 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 PCLAFQ15004 111 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 PPM1JQ5JR12 505 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 TRAPPC3LQ5T215 181 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 CPXCR1Q8N123 301 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 GSDMBQ8TAX9 411 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 CAAP1Q9H8G2 361 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 TMEM221A6NGB7 291 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 TPP1O14773 563 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 PTPN1P18031 435 aaKnown RBP14.38□□□□□ -0.11
VPS52-212ENST00000445902 PRKCHP24723 683 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 MIPP30301 263 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 CDK18Q07002 472 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
VPS52-212ENST00000445902 SLC9B1Q4ZJI4 515 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 ITPRIPL1Q6GPH6 555 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 DENND1BQ6P3S1 775 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 SMYD1Q8NB12 490 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 TSPAN14Q8NG11 270 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 RRN3Q9NYV6 651 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 RIMS3Q9UJD0 308 aa14.38□□□□□ -0.11
VPS52-212ENST00000445902 COL16A1Q07092 1604 aaPredicted RBP14.38□□□□□ -0.11
VPS52-212ENST00000445902 SLX4Q8IY92 1834 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 TMX2-CTNND1H3BSU7 103 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 AMHP03971 560 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CD19P15391 556 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 GARTP22102 1010 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 RBL1P28749 1068 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CDH6P55285 790 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 CDH15P55291 814 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 MCCD1P59942 119 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 MS4A2Q01362 244 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 KLF10Q13118 480 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 PRKG1Q13976 671 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 PATL1Q86TB9 770 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 C4orf19Q8IY42 314 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 THNSL1Q8IYQ7 743 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 ZSCAN18Q8TBC5 510 aaPredicted RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 NLRP4Q96MN2 994 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 TUT1Q9H6E5 874 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 TDRD3Q9H7E2 651 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 STAMBPO95630 424 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 ATP5BP06576 529 aaKnown RBP14.37□□□□□ -0.11
VPS52-212ENST00000445902 EPHA3P29320 983 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 POTEHQ6S545 545 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 ZBTB46Q86UZ6 589 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 SNX32Q86XE0 403 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 MAPK15Q8TD08 544 aa14.37□□□□□ -0.11
VPS52-212ENST00000445902 GIPC3Q8TF64 312 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms