RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 GEN1Q17RS7 908 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 KIAA1324Q6UXG2 1013 aaKnown RBP22.01■■□□□ 1.11
VSX1-206ENST00000444511 FMNL3Q8IVF7 1028 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 CPXM2Q8N436 756 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 UBR7Q8N806 425 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 DDI1Q8WTU0 396 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 UCMAQ8WVF2 138 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 NT5C1BQ96P26 610 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 MAN1B1Q9UKM7 699 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 STON1Q9Y6Q2 735 aa22.01■■□□□ 1.11
VSX1-206ENST00000444511 NPC1O15118 1278 aa22■■□□□ 1.11
VSX1-206ENST00000444511 MAPK8P45983 427 aa22■■□□□ 1.11
VSX1-206ENST00000444511 HARS2P49590 506 aaKnown RBP22■■□□□ 1.11
VSX1-206ENST00000444511 ZNF33AQ06730 810 aa22■■□□□ 1.11
VSX1-206ENST00000444511 CETN1Q12798 172 aa22■■□□□ 1.11
VSX1-206ENST00000444511 SH3PXD2AQ5TCZ1 1133 aa22■■□□□ 1.11
VSX1-206ENST00000444511 PEAR1Q5VY43 1037 aaPredicted RBP22■■□□□ 1.11
VSX1-206ENST00000444511 BSPRYQ5W0U4 402 aa22■■□□□ 1.11
VSX1-206ENST00000444511 KLHL10Q6JEL2 608 aa22■■□□□ 1.11
VSX1-206ENST00000444511 SLC23A3Q6PIS1 610 aa22■■□□□ 1.11
VSX1-206ENST00000444511 TMEM270Q6UE05 265 aa22■■□□□ 1.11
VSX1-206ENST00000444511 BHLHA9Q7RTU4 235 aa22■■□□□ 1.11
VSX1-206ENST00000444511 ANKS1BQ7Z6G8 1248 aa22■■□□□ 1.11
VSX1-206ENST00000444511 ELOA2Q8IYF1 753 aaPredicted RBP22■■□□□ 1.11
VSX1-206ENST00000444511 CEP76Q8TAP6 659 aa22■■□□□ 1.11
VSX1-206ENST00000444511 EDEM1Q92611 657 aa22■■□□□ 1.11
VSX1-206ENST00000444511 MRGPRX1Q96LB2 322 aa22■■□□□ 1.11
VSX1-206ENST00000444511 SLC6A17Q9H1V8 727 aa22■■□□□ 1.11
VSX1-206ENST00000444511 HBS1LQ9Y450 684 aaKnown RBP22■■□□□ 1.11
VSX1-206ENST00000444511 PCDHB4Q9Y5E5 795 aa22■■□□□ 1.11
VSX1-206ENST00000444511 CNOT1A5YKK6 2376 aaKnown RBP21.99■■□□□ 1.11
VSX1-206ENST00000444511 MYO18AQ92614 2054 aaKnown RBP21.99■■□□□ 1.11
VSX1-206ENST00000444511 PAEPP09466 180 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 CD44P16070 742 aaKnown RBP21.99■■□□□ 1.11
VSX1-206ENST00000444511 ENGP17813 658 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 E2F5Q15329 346 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 TRIP4Q15650 581 aaPredicted RBP21.99■■□□□ 1.11
VSX1-206ENST00000444511 DUOXA1Q1HG43 343 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 LCLAT1Q6UWP7 414 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 PPM1KQ8N3J5 372 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 KCTD13Q8WZ19 329 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 SLC2A11Q9BYW1 496 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 ABCC13Q9NSE7 274 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 THAP10Q9P2Z0 257 aaPredicted RBP21.99■■□□□ 1.11
VSX1-206ENST00000444511 SLC6A14Q9UN76 642 aa21.99■■□□□ 1.11
VSX1-206ENST00000444511 TPRP12270 2363 aaKnown RBP21.98■■□□□ 1.11
VSX1-206ENST00000444511 PLXND1Q9Y4D7 1925 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 ACACBO00763 2458 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 YJEFN3A6XGL0 299 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 E7ENQ6 273 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 GIPC1O14908 333 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 PMM2O15305 246 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 NDUFS2O75306 463 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 LCP1P13796 627 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 CSRP1P21291 193 aaKnown RBP21.98■■□□□ 1.11
VSX1-206ENST00000444511 IL12RB1P42701 662 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 ZNF132P52740 706 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 ATXN3P54252 364 aaPredicted RBP21.98■■□□□ 1.11
VSX1-206ENST00000444511 EIF4HQ15056 248 aaKnown RBP21.98■■□□□ 1.11
VSX1-206ENST00000444511 FUT11Q495W5 492 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 RABEPKQ7Z6M1 372 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 FAM217AQ8IXS0 508 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 PIWIL1Q96J94 861 aaKnown RBP21.98■■□□□ 1.11
VSX1-206ENST00000444511 HSPA12BQ96MM6 686 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 CIPCQ9C0C6 399 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 CNGB3Q9NQW8 809 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 ELOVL2Q9NXB9 296 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 SFMBT1Q9UHJ3 866 aa21.98■■□□□ 1.11
VSX1-206ENST00000444511 SYNCRIPO60506 623 aaKnown RBP21.97■■□□□ 1.11
VSX1-206ENST00000444511 TSPAN3O60637 253 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 CEACAM1P13688 526 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 RGS7P49802 495 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 DAOAP59103 153 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 SHC2P98077 582 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 GFPT1Q06210 699 aaPredicted RBP21.97■■□□□ 1.11
VSX1-206ENST00000444511 ZNF252P-AS1Q0IIN9 211 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 PKDCCQ504Y2 493 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 MPPE1Q53F39 396 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 TTI2Q6NXR4 508 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 TRIML1Q8N9V2 468 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 NELFBQ8WX92 580 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 TFAP2BQ92481 460 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 PRDM16Q9HAZ2 1276 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 CD93Q9NPY3 652 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 CLEC4EQ9ULY5 219 aa21.97■■□□□ 1.11
VSX1-206ENST00000444511 LAMA1P25391 3075 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 BICDL2A1A5D9 508 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 M0QYV0 167 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 P4HA2O15460 535 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 SERPINF2P08697 491 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 ZNF445P59923 1031 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 ARID5AQ03989 594 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 STILQ15468 1287 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 CNGA2Q16280 664 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 ST3GAL2Q16842 350 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 SLC41A1Q8IVJ1 513 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 RGL4Q8IZJ4 473 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 SCML4Q8N228 414 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 KAT5Q92993 513 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 GTPBP2Q9BX10 602 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms