RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 KCNK3O14649 394 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 LILRB3O75022 631 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 RNF8O76064 485 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 VNN2O95498 520 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 C1RP00736 705 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CD72P21854 359 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 TGM1P22735 817 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 OR1D2P34982 312 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 PCK1P35558 622 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 MATKP42679 507 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 PEX5P50542 639 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 SLC5A3P53794 718 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 RWDD2BP57060 319 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 YWHAZP63104 245 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 LPAL2Q16609 132 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 HADHQ16836 314 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CC2D1AQ6P1N0 951 aaPredicted RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 ZNF572Q7Z3I7 529 aaPredicted RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 RASGEF1CQ8N431 466 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 GPR161Q8N6U8 529 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 EMC1Q8N766 993 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CEP112Q8N8E3 955 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 ATAD1Q8NBU5 361 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 ZNF461Q8TAF7 563 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CLEC4CQ8WTT0 213 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 SMG7Q92540 1137 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CENPIQ92674 756 aaPredicted RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 GOLGA1Q92805 767 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 NT5C3BQ969T7 300 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 POPDC2Q9HBU9 364 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 STAP1Q9ULZ2 295 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 MAP1BP46821 2468 aaKnown RBP12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 USP24Q9UPU5 2620 aa12.23□□□□□ -0.45
AC009404.1-202ENST00000439955 CHD8Q9HCK8 2581 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 FAM92AA1XBS5 289 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ADAM12O43184 909 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 LRCH4O75427 683 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 SLU7O95391 586 aaKnown RBP12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 LTFP02788 710 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 KRT7P08729 469 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 LAMP2P13473 410 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ATF2P15336 505 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 NOS2P35228 1153 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 PAFAH1B1P43034 410 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ARPP19P56211 112 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 STARD6P59095 220 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 TUBB4BP68371 445 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 HTR4Q13639 388 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 SLC25A52Q3SY17 297 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 TRNP1Q6NT89 227 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 STRADAQ7RTN6 431 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 CREG2Q8IUH2 290 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 CMASQ8NFW8 434 aaPredicted RBP12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 ACTRT1Q8TDG2 376 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 COG1Q8WTW3 980 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 KRT35Q92764 455 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 NAP1L3Q99457 506 aaPredicted RBP12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 DDX56Q9NY93 547 aaKnown RBP12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 SCML2Q9UQR0 700 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 PCDHGA2Q9Y5H1 932 aa12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.22□□□□□ -0.45
AC009404.1-202ENST00000439955 MYO16Q9Y6X6 1858 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 BAHCC1Q9P281 2608 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 FAM170BA6NMN3 283 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 YJEFN3A6XGL0 299 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 E7ENQ6 273 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 ANHXE9PGG2 379 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 TEX28O15482 410 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 GRAP2O75791 330 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 ENDOD1O94919 500 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 USP17L7P0C7H9 530 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 TERF1P54274 439 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 TAS2R40P59535 323 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 SLC25A11Q02978 314 aaKnown RBP12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 SPEM2Q0P670 501 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 DUSP4Q13115 394 aa12.21□□□□□ -0.45
AC009404.1-202ENST00000439955 TAF5Q15542 800 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms