RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PTF1AQ7RTS3 328 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 KRT27Q7Z3Y8 459 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CACNA2D3Q8IZS8 1091 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 GALNT4Q8N4A0 578 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 ATG16L2Q8NAA4 619 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 MAFAQ8NHW3 353 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 ADAMTS18Q8TE60 1221 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 PAAF1Q9BRP4 392 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 EPS8L2Q9H6S3 715 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 USP29Q9HBJ7 922 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 FSCN3Q9NQT6 498 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 VPS45Q9NRW7 570 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 ASIC5Q9NY37 505 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 LRFN1Q9P244 771 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 UBE2J1Q9Y385 318 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CGB1A6NKQ9 187 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TISP43B9A030 160 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 H3BNC9 293 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 ACKR2O00590 384 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FCHO1O14526 889 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TAF5LO75529 589 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TNFRSF6BO95407 300 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 CHKAP35790 457 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 CBFBQ13951 182 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 KCNB1Q14721 858 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 LARS2Q15031 903 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FAM187BQ17R55 369 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TUBB8Q3ZCM7 444 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 ATPAF1Q5TC12 328 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 RINT1Q6NUQ1 792 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 MSANTD2Q6P1R3 559 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TMEM65Q6PI78 240 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 VSTM1Q6UX27 236 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 DCDC5Q6ZRR9 648 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 SEMA6DQ8NFY4 1073 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 HASPINQ8TF76 798 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 HIC2Q96JB3 615 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC17Q96LX7 622 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 RNF26Q9BY78 433 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 SAP30LQ9HAJ7 183 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FBXO28Q9NVF7 368 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 HERC5Q9UII4 1024 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FZD4Q9ULV1 537 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FRMD4BQ9Y2L6 1034 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 FNDC1Q4ZHG4 1894 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 SPATA31A1Q5TZJ5 1347 aa4.22□□□□□ -1.73
TRAPPC13-204ENST00000438419 TCRBV5S1A1TA0A578 114 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 LINC01548A6NM66 108 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 SMIM22K7EJ46 135 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 TRIM38O00635 465 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 DNPH1O43598 174 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 PIP5K1CO60331 668 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 PRAMEF2O60811 474 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 DUSP1P28562 367 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 AKT1P31749 480 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 GALNSP34059 522 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 IGHMBP2P38935 993 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 GRK6P43250 576 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 JAK3P52333 1124 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 RAE1P78406 368 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 GRM4Q14833 912 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 TMEM119Q4V9L6 283 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 PRAMEF17Q5VTA0 474 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 ZNF782Q6ZMW2 699 aaPredicted RBP4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 TRABD2AQ86V40 505 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 OR52L2PQ8NGH6 319 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 FAR2Q96K12 515 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 RITA1Q96K30 269 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 HERPUD2Q9BSE4 406 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 RTKNQ9BST9 563 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 MAGEH1Q9H213 219 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 AGO4Q9HCK5 861 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 KCNK9Q9NPC2 374 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 MAFFQ9ULX9 164 aa4.21□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC187A0A096LP49 1063 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 ACTL6BO94805 426 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 LATS1O95835 1130 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 PRKCGP05129 697 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC3A2P08195 630 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 KLRK1P26718 216 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 PPM1FP49593 454 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 KRTAP10-9P60411 292 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 WDR5P61964 334 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 TUBA4AP68366 448 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC10A2Q12908 348 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 FOXF2Q12947 444 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 MFSD13AQ14CX5 517 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 TRIM60Q495X7 471 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 TANGO2Q6ICL3 276 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 ACSM6Q6P461 480 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 KLHL17Q6TDP4 642 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 RINLQ6ZS11 566 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 RAB11FIP2Q7L804 512 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 CHSY1Q86X52 802 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 PNLDC1Q8NA58 520 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 MYRIPQ8NFW9 859 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 TRAPPC12Q8WVT3 735 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 GLMPQ8WWB7 406 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 CCT6BQ92526 530 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms