RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
PPP4R1-202ENST00000400555 TCRBV5S1A1TA0A578 114 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 TBX10O75333 385 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 ALADP13716 330 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 GHRHRQ02643 423 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 CUL3Q13618 768 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PARP6Q2NL67 630 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 TCHHL1Q5QJ38 904 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 TP53INP2Q8IXH6 220 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PDZD7Q9H5P4 517 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PNPOQ9NVS9 261 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 LGALS2P05162 132 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 AVPR1AP37288 418 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 VHLP40337 213 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 THEMIS2Q5TEJ8 643 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 FZD8Q9H461 694 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 H3BRB1 525 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 TPP1O14773 563 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 MAGEB2O15479 319 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 ITM2AO43736 263 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PSMG1O95456 288 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 HSPA4LO95757 839 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 GNL1P36915 607 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC6A3Q01959 620 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 USP4Q13107 963 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 GRAMD1BQ3KR37 738 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 CAND1Q86VP6 1230 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 SCUBE1Q8IWY4 988 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PQLC3Q8N755 202 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 TUT1Q9H6E5 874 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
PPP4R1-202ENST00000400555 EVPLQ92817 2033 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 M0QYT0 321 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 RNF220Q5VTB9 566 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 LRRC74BQ6ZQY2 392 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 DEFB106AQ8N104 65 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 DCLK2Q8N568 766 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 GSTCDQ8NEC7 633 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 MCRS1Q96EZ8 462 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 TBCBQ99426 244 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 EIF2AQ9BY44 585 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 XAB2Q9HCS7 855 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SCOCQ9UIL1 159 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 TCN1P20061 433 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 PSMB4P28070 264 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC8A3P57103 927 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 ADIGQ0VDE8 80 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC10A2Q12908 348 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 PRAMEF19Q5SWL8 479 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 GSDMBQ8TAX9 411 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 VCXQ9H320 206 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 USP29Q9HBJ7 922 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 AIM2O14862 343 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 FAM189A1O60320 539 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 IZUMO2Q6UXV1 221 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 RNF135Q8IUD6 432 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SIX6OS1Q8N1H7 587 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 NLGN2Q8NFZ4 835 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 TFB1MQ8WVM0 346 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 GBP5Q96PP8 586 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 TSC22D3Q99576 134 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 PSAT1Q9Y617 370 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 DNAH12Q6ZR08 3092 aa13.07□□□□□ -0.32
PPP4R1-202ENST00000400555 KIAA1217Q5T5P2 1943 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 RNF103O00237 685 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 NDUFV1P49821 464 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 HDAC4P56524 1084 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms