RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FRMD1Q8N878 549 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 OR6J1Q8NGC5 347 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ZFAND2BQ8WV99 257 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 GIMAP1Q8WWP7 306 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SYAP1Q96A49 352 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 C1orf21Q9H246 121 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 VPS16Q9H269 839 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SLC35C2Q9NQQ7 365 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PAPOLBQ9NRJ5 636 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 KCND3Q9UK17 655 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FAM184BQ9ULE4 1060 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ASB1Q9Y576 335 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PCDHB6Q9Y5E3 794 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 X6R8D5 127 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CCDC180Q9P1Z9 1646 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 FAM25EA8MYX2 175 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 AKR1B15C9JRZ8 316 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 KRIT1O00522 736 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 SLC27A2O14975 620 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PROM1O43490 865 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 KLHL41O60662 606 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 OPHN1O60890 802 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 TPPPO94811 219 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 CCNDBP1O95273 360 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 SNRPA1P09661 255 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 HOXA11P31270 313 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 TCF7P36402 384 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 KCNJ5P48544 419 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 GPR15P49685 360 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 SH3BGRP55822 239 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 HDAC4P56524 1084 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 SLC26A5P58743 744 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ROM1Q03395 351 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 YWHAHQ04917 246 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 TNFAIP1Q13829 316 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 OASLQ15646 514 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 DCAF12L1Q5VU92 463 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 NAA35Q5VZE5 725 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ADALQ6DHV7 355 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 FAM83HQ6ZRV2 1179 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ARHGEF18Q6ZSZ5 1173 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 CCDC186Q7Z3E2 898 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 RALYLQ86SE5 291 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 LINC00346Q8IVM7 164 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 RHOT2Q8IXI1 618 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 MPP5Q8N3R9 675 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 GPR156Q8NFN8 814 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 LINS1Q8NG48 757 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 RSC1A1Q92681 617 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 TNPO1Q92973 898 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ATP6V0A1Q93050 837 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 RMDN1Q96DB5 314 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PERPQ96FX8 193 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 WRNIP1Q96S55 665 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 FOXB1Q99853 325 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PHF7Q9BWX1 381 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-204ENST00000396464 KLHL4Q9C0H6 718 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 RMI1Q9H9A7 625 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 MID1IP1Q9NPA3 183 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 HOXC10Q9NYD6 342 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 FTSJ1Q9UET6 329 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 CROTQ9UKG9 612 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PAXBP1Q9Y5B6 917 aa5.3□□□□□ -1.56
GABPB1-204ENST00000396464 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 A4D1N5 150 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 RGSL1A5PLK6 1076 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A18PA6NE21 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A16PA6NEW6 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 URADA6NGE7 173 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A9PA6NNJ1 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A5PA8MXJ8 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 K7EPI3 171 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 F2RL2O00254 374 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 TNPO2O14787 897 aaKnown RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 HGSO14964 777 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 TGFB1I1O43294 461 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 EXOC3O60645 756 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 PPP6R2O75170 966 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 RASSF9O75901 435 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 MATN4O95460 622 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FTCDO95954 541 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 HEXBP07686 556 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A15PP0C7V4 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A14PP0C7W9 464 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 TACR2P21452 398 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 NFKBIAP25963 317 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 IL13P35225 146 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 CAPZA2P47755 286 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 HSD17B4P51659 736 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 HMGA2P52926 109 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 PTP4A2Q12974 167 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms