RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 DESP17661 470 aa18.38■□□□□ 0.53
APP-202ENST00000348990 NELFEP18615 380 aaKnown RBP18.38■□□□□ 0.53
APP-202ENST00000348990 ITGAXP20702 1163 aa18.38■□□□□ 0.53
APP-202ENST00000348990 TGFB2P61812 414 aa18.38■□□□□ 0.53
APP-202ENST00000348990 CLDN10P78369 228 aa18.38■□□□□ 0.53
APP-202ENST00000348990 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
APP-202ENST00000348990 FLOT2Q14254 428 aa18.38■□□□□ 0.53
APP-202ENST00000348990 FAM151AQ8WW52 585 aa18.38■□□□□ 0.53
APP-202ENST00000348990 CDKL2Q92772 493 aa18.38■□□□□ 0.53
APP-202ENST00000348990 ZNF358Q9NW07 568 aa18.38■□□□□ 0.53
APP-202ENST00000348990 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
APP-202ENST00000348990 COL16A1Q07092 1604 aaPredicted RBP18.37■□□□□ 0.53
APP-202ENST00000348990 IL1BP01584 269 aa18.37■□□□□ 0.53
APP-202ENST00000348990 RALBP11234 206 aa18.37■□□□□ 0.53
APP-202ENST00000348990 GK3PQ14409 553 aa18.37■□□□□ 0.53
APP-202ENST00000348990 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
APP-202ENST00000348990 C6orf52Q5T4I8 152 aa18.37■□□□□ 0.53
APP-202ENST00000348990 ARCQ7LC44 396 aa18.37■□□□□ 0.53
APP-202ENST00000348990 TRIML2Q8N7C3 387 aa18.37■□□□□ 0.53
APP-202ENST00000348990 NCSTNQ92542 709 aa18.37■□□□□ 0.53
APP-202ENST00000348990 PEBP4Q96S96 227 aa18.37■□□□□ 0.53
APP-202ENST00000348990 SEPT10Q9P0V9 454 aa18.37■□□□□ 0.53
APP-202ENST00000348990 SORCS3Q9UPU3 1222 aa18.37■□□□□ 0.53
APP-202ENST00000348990 AP4B1Q9Y6B7 739 aa18.37■□□□□ 0.53
APP-202ENST00000348990 BIRC5O15392 142 aa18.37■□□□□ 0.53
APP-202ENST00000348990 CCNT2O60583 730 aaKnown RBP18.37■□□□□ 0.53
APP-202ENST00000348990 SNNO75324 88 aaPredicted RBP18.37■□□□□ 0.53
APP-202ENST00000348990 COX4I1P13073 169 aa18.37■□□□□ 0.53
APP-202ENST00000348990 ABCG1P45844 678 aa18.37■□□□□ 0.53
APP-202ENST00000348990 SERPINB9P50453 376 aa18.37■□□□□ 0.53
APP-202ENST00000348990 ZNF132P52740 706 aa18.37■□□□□ 0.53
APP-202ENST00000348990 HDAC4P56524 1084 aa18.37■□□□□ 0.53
APP-202ENST00000348990 CYLC2Q14093 348 aaPredicted RBP18.37■□□□□ 0.53
APP-202ENST00000348990 VPS72Q15906 364 aa18.37■□□□□ 0.53
APP-202ENST00000348990 FSCBQ5H9T9 825 aa18.37■□□□□ 0.53
APP-202ENST00000348990 PQLC1Q8N2U9 271 aa18.37■□□□□ 0.53
APP-202ENST00000348990 CMASQ8NFW8 434 aaPredicted RBP18.37■□□□□ 0.53
APP-202ENST00000348990 ZNF778Q96MU6 729 aa18.37■□□□□ 0.53
APP-202ENST00000348990 CDRT15Q96T59 188 aa18.37■□□□□ 0.53
APP-202ENST00000348990 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
APP-202ENST00000348990 PCDHGB4Q9UN71 923 aa18.37■□□□□ 0.53
APP-202ENST00000348990 PCDHGB5Q9Y5G0 923 aa18.37■□□□□ 0.53
APP-202ENST00000348990 XPO1O14980 1071 aaKnown RBP18.36■□□□□ 0.53
APP-202ENST00000348990 SERPINE1P05121 402 aa18.36■□□□□ 0.53
APP-202ENST00000348990 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
APP-202ENST00000348990 XYLT1Q86Y38 959 aa18.36■□□□□ 0.53
APP-202ENST00000348990 TFB1MQ8WVM0 346 aaKnown RBP18.36■□□□□ 0.53
APP-202ENST00000348990 CEP41Q9BYV8 373 aa18.36■□□□□ 0.53
APP-202ENST00000348990 FAF1Q9UNN5 650 aaPredicted RBP18.36■□□□□ 0.53
APP-202ENST00000348990 RIPK3Q9Y572 518 aa18.36■□□□□ 0.53
APP-202ENST00000348990 COL24A1Q17RW2 1714 aa18.36■□□□□ 0.53
APP-202ENST00000348990 TBC1D12O60347 775 aa18.36■□□□□ 0.53
APP-202ENST00000348990 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
APP-202ENST00000348990 PLD5Q8N7P1 536 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ACTRT2Q8TDY3 377 aa18.36■□□□□ 0.53
APP-202ENST00000348990 RNF157Q96PX1 679 aa18.36■□□□□ 0.53
APP-202ENST00000348990 EBNA1BP2Q99848 306 aaKnown RBP18.36■□□□□ 0.53
APP-202ENST00000348990 BTBD7Q9P203 1132 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
APP-202ENST00000348990 CNTN6Q9UQ52 1028 aa18.36■□□□□ 0.53
APP-202ENST00000348990 EDN1P05305 212 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ADORA2AP29274 412 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ADARP55265 1226 aaKnown RBP18.36■□□□□ 0.53
APP-202ENST00000348990 UGT2A3Q6UWM9 527 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ADGRG6Q86SQ4 1221 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ZNF302Q9NR11 478 aa18.36■□□□□ 0.53
APP-202ENST00000348990 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
APP-202ENST00000348990 ZNF711Q9Y462 761 aa18.36■□□□□ 0.53
APP-202ENST00000348990 MYO18AQ92614 2054 aaKnown RBP18.35■□□□□ 0.53
APP-202ENST00000348990 METTL18O95568 372 aa18.35■□□□□ 0.53
APP-202ENST00000348990 GPD1P21695 349 aa18.35■□□□□ 0.53
APP-202ENST00000348990 PABPC1LQ4VXU2 614 aaKnown RBP18.35■□□□□ 0.53
APP-202ENST00000348990 HACE1Q8IYU2 909 aa18.35■□□□□ 0.53
APP-202ENST00000348990 KLHL23Q8NBE8 558 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ADAM32Q8TC27 787 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ANKRD36BP1Q96IX9 119 aa18.35■□□□□ 0.53
APP-202ENST00000348990 LENG8Q96PV6 779 aaPredicted RBP18.35■□□□□ 0.53
APP-202ENST00000348990 SYNPO2Q9UMS6 1093 aa18.35■□□□□ 0.53
APP-202ENST00000348990 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
APP-202ENST00000348990 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
APP-202ENST00000348990 GLRA3O75311 464 aa18.35■□□□□ 0.53
APP-202ENST00000348990 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
APP-202ENST00000348990 GABRB2P47870 512 aa18.35■□□□□ 0.53
APP-202ENST00000348990 TMEM259Q4ZIN3 620 aa18.35■□□□□ 0.53
APP-202ENST00000348990 BRSK2Q8IWQ3 736 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
APP-202ENST00000348990 MOCOSQ96EN8 888 aa18.35■□□□□ 0.53
APP-202ENST00000348990 SERPINI1Q99574 410 aa18.35■□□□□ 0.53
APP-202ENST00000348990 USP29Q9HBJ7 922 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ZDHHC7Q9NXF8 308 aa18.35■□□□□ 0.53
APP-202ENST00000348990 PTTG2Q9NZH5 202 aa18.35■□□□□ 0.53
APP-202ENST00000348990 ARHGAP10A1A4S6 786 aa18.34■□□□□ 0.53
APP-202ENST00000348990 CSDE1O75534 798 aaKnown RBP18.34■□□□□ 0.53
APP-202ENST00000348990 PRKCHP24723 683 aa18.34■□□□□ 0.53
APP-202ENST00000348990 NAMPTP43490 491 aa18.34■□□□□ 0.53
APP-202ENST00000348990 PDK1Q15118 436 aa18.34■□□□□ 0.53
APP-202ENST00000348990 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
APP-202ENST00000348990 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 MBLAC2Q68D91 279 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms