RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SPAARA0A1B0GVQ0 90 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 UPK3BL1B0FP48 263 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 UPK3BL2E5RIL1 263 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 CHKAP35790 457 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 IL12RB1P42701 662 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 YWHAGP61981 247 aaKnown RBP eCLIP18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 PNOCQ13519 176 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 FUT11Q495W5 492 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 CBWD6Q4V339 395 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 CBWD3Q5JTY5 395 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 CBWD5Q5RIA9 395 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 KIAA1324Q6UXG2 1013 aaKnown RBP18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 BHLHA9Q7RTU4 235 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 DCLK3Q9C098 648 aa18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
EXOSC4-201ENST00000316052 CKAP5Q14008 2032 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 SLC12A8A0AV02 714 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ARHGAP33O14559 1287 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 CETN3O15182 167 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 NDUFS2O75306 463 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 EPB41P11171 864 aaKnown RBP18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 MAOBP27338 520 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 PRCPP42785 496 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 TKTL1P51854 596 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ATXN3P54252 364 aaPredicted RBP18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 FAM193AP78312 1265 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ENPP2Q13822 863 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 PM20D1Q6GTS8 502 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ARHGAP18Q8N392 663 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 MINDY1Q8N5J2 469 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 RBBP8NLQ8NC74 664 aaPredicted RBP18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ADAM33Q9BZ11 813 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ULBP1Q9BZM6 244 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 SLC32A1Q9H598 525 aa18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 RALYQ9UKM9 306 aaKnown RBP18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 ANKRD11Q6UB99 2663 aaPredicted RBP18.29■□□□□ 0.52
EXOSC4-201ENST00000316052 KCNJ18B7U540 433 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 OPHN1O60890 802 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 ZBED1O96006 694 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 CD59P13987 128 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 PDE4CQ08493 712 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 GOLGA7BQ2TAP0 167 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 TMEM215Q68D42 235 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 RABEPKQ7Z6M1 372 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 METTL3Q86U44 580 aaKnown RBP18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 CPXM2Q8N436 756 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 HDDC3Q8N4P3 179 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 KDF1Q8NAX2 398 aaPredicted RBP18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 SORCS1Q8WY21 1168 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 GATA6Q92908 595 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 PRDM16Q9HAZ2 1276 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 ELOVL2Q9NXB9 296 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 ZMIZ1Q9ULJ6 1067 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 COQ4Q9Y3A0 265 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 NBEAQ8NFP9 2946 aa18.28■□□□□ 0.52
EXOSC4-201ENST00000316052 HYAL3O43820 417 aaPredicted RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 STX10O60499 249 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 CD6P30203 668 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 PMS1P54277 932 aaKnown RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 SIM1P81133 766 aaPredicted RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 STARD3Q14849 445 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 TRIP4Q15650 581 aaPredicted RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 ANKRD40Q6AI12 368 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 FAM217AQ8IXS0 508 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 RGL4Q8IZJ4 473 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 TOE1Q96GM8 510 aaKnown RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 ITM2CQ9NQX7 267 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 WSB2Q9NYS7 404 aaPredicted RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 USP36Q9P275 1121 aaKnown RBP18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 TSPAN16Q9UKR8 245 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 STRIP2Q9ULQ0 834 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 LAMA5O15230 3695 aa18.27■□□□□ 0.52
EXOSC4-201ENST00000316052 XPO1O14980 1071 aaKnown RBP18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 NPC1O15118 1278 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 GJB3O75712 270 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 PRKCHP24723 683 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 CUL2Q13617 745 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 ZNF234Q14588 700 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 DCAF17Q5H9S7 520 aaPredicted RBP18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 SYCP2LQ5T4T6 812 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 TCERG1LQ5VWI1 586 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 ANKS1BQ7Z6G8 1248 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 TMPRSS6Q8IU80 811 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 FMNL3Q8IVF7 1028 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 ZC3H3Q8IXZ2 948 aaKnown RBP18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 FMR1NBQ8N0W7 255 aaPredicted RBP18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 UBA3Q8TBC4 463 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 DDI1Q8WTU0 396 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 FOXJ1Q92949 421 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 CAMK1GQ96NX5 476 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 GPR174Q9BXC1 333 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 DNAAF2Q9NVR5 837 aaKnown RBP18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 SFMBT1Q9UHJ3 866 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 ATP6V1DQ9Y5K8 247 aa18.26■□□□□ 0.51
EXOSC4-201ENST00000316052 TSPAN3O60637 253 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 CYBBP04839 570 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms