RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 USP36Q9P275 1121 aaKnown RBP8.81□□□□□ -1
MSL3-201ENST00000312196 DKK4Q9UBT3 224 aa8.81□□□□□ -1
MSL3-201ENST00000312196 MBD1Q9UIS9 605 aaPredicted RBP8.81□□□□□ -1
MSL3-201ENST00000312196 PILRBQ9UKJ0 227 aa8.81□□□□□ -1
MSL3-201ENST00000312196 TSPAN16Q9UKR8 245 aa8.81□□□□□ -1
MSL3-201ENST00000312196 AGO1Q9UL18 857 aaKnown RBP8.81□□□□□ -1
MSL3-201ENST00000312196 PCDHGB2Q9Y5G2 931 aa8.81□□□□□ -1
MSL3-201ENST00000312196 F5P12259 2224 aa8.81□□□□□ -1
MSL3-201ENST00000312196 SPTBN4Q9H254 2564 aa8.81□□□□□ -1
MSL3-201ENST00000312196 C4orf47A7E2U8 309 aa8.81□□□□□ -1
MSL3-201ENST00000312196 KLKB1P03952 638 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ASLP04424 464 aa8.81□□□□□ -1
MSL3-201ENST00000312196 SYPP08247 313 aa8.81□□□□□ -1
MSL3-201ENST00000312196 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
MSL3-201ENST00000312196 SCNN1AP37088 669 aa8.81□□□□□ -1
MSL3-201ENST00000312196 MFAP3P55082 362 aa8.81□□□□□ -1
MSL3-201ENST00000312196 OXCT1P55809 520 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
MSL3-201ENST00000312196 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
MSL3-201ENST00000312196 CCDC40Q4G0X9 1142 aa8.81□□□□□ -1
MSL3-201ENST00000312196 NUGGCQ68CJ6 796 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ANKS1BQ7Z6G8 1248 aa8.81□□□□□ -1
MSL3-201ENST00000312196 MDGA1Q8NFP4 955 aa8.81□□□□□ -1
MSL3-201ENST00000312196 IPO4Q8TEX9 1081 aaKnown RBP8.81□□□□□ -1
MSL3-201ENST00000312196 EEF2KMTQ96G04 330 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ZNF419Q96HQ0 510 aaPredicted RBP8.81□□□□□ -1
MSL3-201ENST00000312196 SLC4A5Q9BY07 1137 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
MSL3-201ENST00000312196 ULBP1Q9BZM6 244 aa8.81□□□□□ -1
MSL3-201ENST00000312196 RASAL2Q9UJF2 1139 aa8.81□□□□□ -1
MSL3-201ENST00000312196 LNP1A1A4G5 178 aa8.8□□□□□ -1
MSL3-201ENST00000312196 C10orf142B7Z368 130 aa8.8□□□□□ -1
MSL3-201ENST00000312196 GABRG2P18507 467 aa8.8□□□□□ -1
MSL3-201ENST00000312196 BMP6P22004 513 aa8.8□□□□□ -1
MSL3-201ENST00000312196 CORO1AP31146 461 aaKnown RBP8.8□□□□□ -1
MSL3-201ENST00000312196 HARS2P49590 506 aaKnown RBP8.8□□□□□ -1
MSL3-201ENST00000312196 SNX16P57768 344 aa8.8□□□□□ -1
MSL3-201ENST00000312196 KDSRQ06136 332 aa8.8□□□□□ -1
MSL3-201ENST00000312196 ADGRF1Q5T601 910 aa8.8□□□□□ -1
MSL3-201ENST00000312196 SMYD4Q8IYR2 804 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 SIX6OS1Q8N1H7 587 aa8.8□□□□□ -1
MSL3-201ENST00000312196 FOXJ1Q92949 421 aa8.8□□□□□ -1
MSL3-201ENST00000312196 TTC17Q96AE7 1141 aa8.8□□□□□ -1
MSL3-201ENST00000312196 LMLNQ96KR4 655 aa8.8□□□□□ -1
MSL3-201ENST00000312196 LHX5Q9H2C1 402 aa8.8□□□□□ -1
MSL3-201ENST00000312196 CAPN10Q9HC96 672 aa8.8□□□□□ -1
MSL3-201ENST00000312196 ITM2CQ9NQX7 267 aa8.8□□□□□ -1
MSL3-201ENST00000312196 KIAA1522Q9P206 1035 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 SCML1Q9UN30 329 aa8.8□□□□□ -1
MSL3-201ENST00000312196 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
MSL3-201ENST00000312196 EP300Q09472 2414 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 PCDH15Q96QU1 1955 aa8.8□□□□□ -1
MSL3-201ENST00000312196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 CXorf51AA0A1B0GTR3 108 aa8.8□□□□□ -1
MSL3-201ENST00000312196 HOXB2P14652 356 aa8.8□□□□□ -1
MSL3-201ENST00000312196 TIE1P35590 1138 aa8.8□□□□□ -1
MSL3-201ENST00000312196 CREB5Q02930 508 aa8.8□□□□□ -1
MSL3-201ENST00000312196 IFRD2Q12894 506 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 ORC1Q13415 861 aa8.8□□□□□ -1
MSL3-201ENST00000312196 EIF4EBP2Q13542 120 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 SLC12A1Q13621 1099 aa8.8□□□□□ -1
MSL3-201ENST00000312196 ANO4Q32M45 955 aa8.8□□□□□ -1
MSL3-201ENST00000312196 C2orf27AQ580R0 203 aa8.8□□□□□ -1
MSL3-201ENST00000312196 DCAF17Q5H9S7 520 aaPredicted RBP8.8□□□□□ -1
MSL3-201ENST00000312196 BSPRYQ5W0U4 402 aa8.8□□□□□ -1
MSL3-201ENST00000312196 LYSMD4Q5XG99 296 aa8.8□□□□□ -1
MSL3-201ENST00000312196 TMEM110Q86TL2 294 aa8.8□□□□□ -1
MSL3-201ENST00000312196 FAM114A1Q8IWE2 563 aa8.8□□□□□ -1
MSL3-201ENST00000312196 CCDC33Q8N5R6 958 aa8.8□□□□□ -1
MSL3-201ENST00000312196 RNF139Q8WU17 664 aa8.8□□□□□ -1
MSL3-201ENST00000312196 DNASE2BQ8WZ79 361 aa8.8□□□□□ -1
MSL3-201ENST00000312196 GOLGA1Q92805 767 aa8.8□□□□□ -1
MSL3-201ENST00000312196 SLC39A13Q96H72 371 aa8.8□□□□□ -1
MSL3-201ENST00000312196 INTS2Q9H0H0 1204 aaKnown RBP8.8□□□□□ -1
MSL3-201ENST00000312196 THAP9Q9H5L6 903 aa8.8□□□□□ -1
MSL3-201ENST00000312196 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
MSL3-201ENST00000312196 CHMP5Q9NZZ3 219 aa8.8□□□□□ -1
MSL3-201ENST00000312196 KIAA1468Q9P260 1216 aa8.8□□□□□ -1
MSL3-201ENST00000312196 SUN2Q9UH99 717 aa8.8□□□□□ -1
MSL3-201ENST00000312196 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
MSL3-201ENST00000312196 C5orf42Q9H799 3197 aa8.8□□□□□ -1
MSL3-201ENST00000312196 ITIH6Q6UXX5 1313 aa8.79□□□□□ -1
MSL3-201ENST00000312196 CKAP5Q14008 2032 aa8.79□□□□□ -1
MSL3-201ENST00000312196 IGHV1OR15-9A0A0B4J2B8 117 aa8.79□□□□□ -1
MSL3-201ENST00000312196 TCRBV21S2A2A0A5A6 115 aa8.79□□□□□ -1
MSL3-201ENST00000312196 SLC12A8A0AV02 714 aa8.79□□□□□ -1
MSL3-201ENST00000312196 NEDD8-MDP1E9PL57 170 aa8.79□□□□□ -1
MSL3-201ENST00000312196 TBX18O95935 607 aa8.79□□□□□ -1
MSL3-201ENST00000312196 IGLV3-25P01717 112 aa8.79□□□□□ -1
MSL3-201ENST00000312196 NCAM1P13591 858 aa8.79□□□□□ -1
MSL3-201ENST00000312196 ERCC5P28715 1186 aaPredicted RBP8.79□□□□□ -1
MSL3-201ENST00000312196 SEC13P55735 322 aa8.79□□□□□ -1
MSL3-201ENST00000312196 KCNH2Q12809 1159 aa8.79□□□□□ -1
MSL3-201ENST00000312196 CAMK2GQ13555 558 aaPredicted RBP8.79□□□□□ -1
MSL3-201ENST00000312196 STARD3Q14849 445 aa8.79□□□□□ -1
MSL3-201ENST00000312196 SH3PXD2AQ5TCZ1 1133 aa8.79□□□□□ -1
MSL3-201ENST00000312196 TTC39BQ5VTQ0 682 aaPredicted RBP8.79□□□□□ -1
MSL3-201ENST00000312196 TCERG1LQ5VWI1 586 aa8.79□□□□□ -1
MSL3-201ENST00000312196 PSAPL1Q6NUJ1 521 aa8.79□□□□□ -1
MSL3-201ENST00000312196 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms